Sequence 1: | NP_609834.2 | Gene: | Lrch / 35041 | FlyBaseID: | FBgn0032633 | Length: | 1135 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021334626.1 | Gene: | lrch1 / 560885 | ZFINID: | ZDB-GENE-030131-1783 | Length: | 786 | Species: | Danio rerio |
Alignment Length: | 793 | Identity: | 264/793 - (33%) |
---|---|---|---|
Similarity: | 382/793 - (48%) | Gaps: | 166/793 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 29 ASLPGSGTGSG-SGIGHAGNTSSSTSSALLSHSQLTRSLERILEEAHFSGELILTNRKLKDFPRT 92
Fly 93 GTKYSLTDTVIADLSRNRFAELPEEVTTFAFLETLLLYHNTIRSIPESVKQLSSLTYLDLRSNQL 157
Fly 158 SSLPREICFLPLQVLLVSNNRLTSLPDELGRLDQTLTDLDASYNQLANLPARLGELRSLRSLSLR 222
Fly 223 SNHLLYLPRELTCLSLISLDVSNNKIASLPLEIRHMSTLVELQLENNPLTSPPASLCMRGLVHVF 287
Fly 288 KFLETQATKDEKGSRSGGNYDGYTTLRRAPRHNSSGNVLEASTTGSTNNQRRHQ---VDSGYNTS 349
Fly 350 DGLDKRWSHDAPTKSKTDSPLHCVSNSTAATLPRTLPSAVHSQADLMDASLTSSTSTIVDES--- 411
Fly 412 ---LTLSPTASPC---KLSYAHSNSSS------NGSSPDQDDDIMLDHQERTVHHANGRSGKGLG 464
Fly 465 NIQTYKEYKEALKQQRNQEISVYKQKHPN-ANHSPNDDEDLSPSPPSI------SNGSSSN---T 519
Fly 520 LPKS-------------------------------IMKQNSNQIGHNGNGNGSANGNGVDDVVIP 553
Fly 554 KKPIQK-VIPSRITEIKPASTSDIRSANSSDCLGYVKP----QSPMKNGTSKFNTSNGGGVQTTV 613
Fly 614 GIVSSTTIKSPVSSTTKLGTVKTHRSVTWNHDIPAEKLSFTMRREFDRQREETELMSQLRTIIET 678
Fly 679 RLKMTLPVDIASALTDGVILCHLANYVRPRSVASIHVPSPGVNKLTMARCRRNVDNFLEACRRIG 743
Fly 744 VDEELICSCEDVV 756 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrch | NP_609834.2 | LRR_8 | 124..179 | CDD:290566 | 32/54 (59%) |
LRR_4 | 124..161 | CDD:289563 | 21/36 (58%) | ||
leucine-rich repeat | 124..146 | CDD:275380 | 13/21 (62%) | ||
leucine-rich repeat | 147..167 | CDD:275380 | 10/19 (53%) | ||
leucine-rich repeat | 169..192 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 193..215 | CDD:275380 | 8/21 (38%) | ||
leucine-rich repeat | 216..237 | CDD:275380 | 8/20 (40%) | ||
leucine-rich repeat | 238..260 | CDD:275380 | 7/21 (33%) | ||
leucine-rich repeat | 261..279 | CDD:275380 | 13/17 (76%) | ||
CH | 676..756 | CDD:214479 | 51/79 (65%) | ||
lrch1 | XP_021334626.1 | leucine-rich repeat | 23..47 | CDD:275380 | 12/35 (34%) |
NEL | <46..>204 | CDD:330839 | 80/158 (51%) | ||
leucine-rich repeat | 51..72 | CDD:275380 | 12/20 (60%) | ||
leucine-rich repeat | 73..95 | CDD:275380 | 11/21 (52%) | ||
leucine-rich repeat | 96..118 | CDD:275380 | 13/21 (62%) | ||
leucine-rich repeat | 119..134 | CDD:275380 | 8/14 (57%) | ||
leucine-rich repeat | 141..163 | CDD:275380 | 11/22 (50%) | ||
leucine-rich repeat | 164..186 | CDD:275380 | 8/21 (38%) | ||
leucine-rich repeat | 187..207 | CDD:275380 | 8/19 (42%) | ||
leucine-rich repeat | 209..231 | CDD:275380 | 7/21 (33%) | ||
leucine-rich repeat | 232..250 | CDD:275380 | 13/17 (76%) | ||
CH | 614..717 | CDD:214479 | 57/90 (63%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 120 | 1.000 | Domainoid score | I5709 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0532 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 386 | 1.000 | Inparanoid score | I1979 |
OMA | 1 | 1.010 | - | - | QHG46074 | |
OrthoDB | 1 | 1.010 | - | - | D186976at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000912 | |
OrthoInspector | 1 | 1.000 | - | - | otm25931 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R3681 |
SonicParanoid | 1 | 1.000 | - | - | X454 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.870 |