Sequence 1: | NP_609834.2 | Gene: | Lrch / 35041 | FlyBaseID: | FBgn0032633 | Length: | 1135 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006252373.1 | Gene: | Lrch1 / 502020 | RGDID: | 1595678 | Length: | 744 | Species: | Rattus norvegicus |
Alignment Length: | 764 | Identity: | 270/764 - (35%) |
---|---|---|---|
Similarity: | 376/764 - (49%) | Gaps: | 158/764 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 44 HAGNTSSSTSSALLSHSQLTRSLERILEEAHFSGELILTNRKLKDFPRTGTK-YSLTDTVIADLS 107
Fly 108 RNRFAELPEEVTTFAFLETLLLYHNTIRSIPESVKQLSSLTYLDLRSNQLSSLPREICFLPLQVL 172
Fly 173 LVSNNRLTSLPDELGRLDQTLTDLDASYNQLANLPARLGELRSLRSLSLRSNHLLYLPRELTCLS 237
Fly 238 LISLDVSNNKIASLPLEIRHMSTLVELQLENNPLTSPPASLCMRGLVHVFKFLETQA----TKDE 298
Fly 299 KGSRSGGNYDGYTTLRRAPRHNSSGNVLEASTTGSTNNQRRHQVDSGYNTSDGLDKRWSHDAPTK 363
Fly 364 SKTDSPLHCVSNSTAATLPRTLPSAVH----SQADLMDA-SLTSSTSTIVDESLTLSPTAS--PC 421
Fly 422 KL-SY-----------------AH-SNSSSNGSSPDQDDDIMLDHQERTVHHANGRSGKGLGNIQ 467
Fly 468 TYKEYKEALKQQRNQEISVYKQKHPNANHSPNDDEDLSPSPPSISNGSSSNTLPKSIMKQNSNQI 532
Fly 533 GHNGNGNGSANGNGVDDVVIPKKPIQKVIPSRITEIKPASTSDIRSANSSDCLGYVKPQSPMKNG 597
Fly 598 TSKFNTSNGGGVQTTVGIVSSTTIKSPVSSTTKLGTVKTHRSVTW---NHDIPAEKLS------- 652
Fly 653 ----------FTMRREFDRQREETELMSQLRTIIETRLKMTLPVDIASALTDGVILCHLANYVRP 707
Fly 708 RSVASIHVPSPGVNKLTMARCRRNVDNFLEACRRIGVDEELICSCEDVV 756 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrch | NP_609834.2 | LRR_8 | 124..179 | CDD:290566 | 32/54 (59%) |
LRR_4 | 124..161 | CDD:289563 | 21/36 (58%) | ||
leucine-rich repeat | 124..146 | CDD:275380 | 13/21 (62%) | ||
leucine-rich repeat | 147..167 | CDD:275380 | 11/19 (58%) | ||
leucine-rich repeat | 169..192 | CDD:275380 | 13/22 (59%) | ||
leucine-rich repeat | 193..215 | CDD:275380 | 9/21 (43%) | ||
leucine-rich repeat | 216..237 | CDD:275380 | 10/20 (50%) | ||
leucine-rich repeat | 238..260 | CDD:275380 | 8/21 (38%) | ||
leucine-rich repeat | 261..279 | CDD:275380 | 12/17 (71%) | ||
CH | 676..756 | CDD:214479 | 56/79 (71%) | ||
Lrch1 | XP_006252373.1 | leucine-rich repeat | 60..82 | CDD:275380 | 11/21 (52%) |
leucine-rich repeat | 83..105 | CDD:275380 | 12/21 (57%) | ||
LRR_RI | <99..214 | CDD:238064 | 60/115 (52%) | ||
LRR_8 | 105..161 | CDD:290566 | 32/55 (58%) | ||
leucine-rich repeat | 106..128 | CDD:275380 | 13/21 (62%) | ||
leucine-rich repeat | 129..144 | CDD:275380 | 9/14 (64%) | ||
leucine-rich repeat | 151..173 | CDD:275380 | 13/21 (62%) | ||
LRR_8 | 172..252 | CDD:290566 | 36/80 (45%) | ||
leucine-rich repeat | 174..196 | CDD:275380 | 9/21 (43%) | ||
leucine-rich repeat | 197..217 | CDD:275380 | 10/19 (53%) | ||
leucine-rich repeat | 219..241 | CDD:275380 | 8/21 (38%) | ||
leucine-rich repeat | 242..261 | CDD:275380 | 12/18 (67%) | ||
CH | 596..685 | CDD:214479 | 60/88 (68%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 121 | 1.000 | Domainoid score | I5549 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0532 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 395 | 1.000 | Inparanoid score | I1898 |
OMA | 1 | 1.010 | - | - | QHG46074 | |
OrthoDB | 1 | 1.010 | - | - | D186976at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000912 | |
OrthoInspector | 1 | 1.000 | - | - | otm45704 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X454 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.880 |