DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Lrch and Phlpp

DIOPT Version :9

Sequence 1:NP_609834.2 Gene:Lrch / 35041 FlyBaseID:FBgn0032633 Length:1135 Species:Drosophila melanogaster
Sequence 2:NP_001260558.1 Gene:Phlpp / 35178 FlyBaseID:FBgn0032749 Length:954 Species:Drosophila melanogaster


Alignment Length:997 Identity:191/997 - (19%)
Similarity:316/997 - (31%) Gaps:312/997 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 HSVAVGVGSA---AGSAIGSGS---ASLPGSGTGSGSGIGHAG------------NTSSSTSSAL 56
            |.:.|.|.:|   ..:..|..|   .||.||..|....||:..            .....:|.|.
  Fly    26 HPLPVEVTAAEEEQAATFGQTSPQKLSLKGSQLGGSILIGNYNYLTQLEVCENEMEVLDLSSLAQ 90

  Fly    57 LSHSQLTRS--LERILEEAHFSGELILTNRKLKDFPRTGTKYSLTDTVIADLSRNRFAELPEEVT 119
            |...:.:|:  :|.|:...:.. .|:..:..|.:...|.|..........|:|.|.|:|||..|.
  Fly    91 LETLKCSRNKLMELIINGTNLQ-TLVADHNYLHNISTTNTHPVPLKLQRIDISHNNFSELPNWVG 154

  Fly   120 TFAFLETLLLYHNTIRSIPESVK--QLSSLTYLDLRSN---QLSSLPREICFLPLQVLLVSNNRL 179
            ..|.|..:...||.:.::...::  :::.|..|||..|   ||...|..  |..::.|.:.:|.|
  Fly   155 ACASLTAINASHNRLNNVAVLLRNYRITELVSLDLAYNDLKQLDQFPEG--FSSIRSLQLQSNEL 217

  Fly   180 TSLPDELGRLDQT-LTDLDASYNQLANLPA-RLGELRSLRSLSLRSNHL-------LYLPRELTC 235
            .||||....:... |..|:.|.|:|:.||. ......:|.:|||..|||       |:...:|..
  Fly   218 PSLPDNFFAVTHARLETLNVSCNKLSTLPRYEQNNHAALVNLSLAGNHLNDSIFEPLHNAAKLRV 282

  Fly   236 LSLI-------------------SLDVSNNKIASLPLEIRHMSTLVELQLENNPLTSPP--ASLC 279
            |.|.                   .|.:|.|.:..||.|:..:..|..|:..||.|...|  |.|.
  Fly   283 LHLAYNRIGVLPAACVRNWPELEILVLSGNMLQQLPEEVATLGQLRVLRCCNNLLLCTPQLAKLA 347

  Fly   280 MRGLVHVFKFLETQATKDEKGSRSGGNYDGYTTLRRAPRHN-----SSGN----VLEASTTGSTN 335
            |      .|.|:.          |..:.|....|...|..|     .|||    |.|.......:
  Fly   348 M------LKVLDL----------SHNHLDRVNLLALVPSRNLKYLDLSGNLQLQVDEQQFKVCQS 396

  Fly   336 NQRRHQVDSGYNTSDGLDKRWSHDAPTKSKTDSPLHCVSNSTAATLPRTLPSAVHSQADLMDASL 400
            ..:||               ||            |..||.:..|.||.|....|.:|   .:.:.
  Fly   397 QSQRH---------------WS------------LVDVSGNNRAALPTTKIRQVSAQ---RNQNK 431

  Fly   401 TSSTSTIVDESLTLSPTASPC-KLSYAHSNSSSNGSSPDQDDDIMLDHQERTVHHANGRSGKGLG 464
            ||...|:   ....:|.:..| |||.....:::.|.|    |:.:....|..  ...||:.:.:.
  Fly   432 TSGPWTM---GFAETPGSGDCRKLSVYQLRAANYGGS----DEALYGMFEAL--EGRGRAAQEMS 487

  Fly   465 N----------------IQTYKEYKEALKQQRNQEISVYKQKHPNANHSPNDDEDLSPSPPSISN 513
            :                ::.|.::.....||:...:......|.....:|:....|...      
  Fly   488 HLVPDLMKQEQMVKDSAVRDYMKFTLLAAQQQCGSVRSAALFHLTRTRAPSKVRPLKSK------ 546

  Fly   514 GSSSNTLPKSIMKQNSNQIGHNGNGNGSANGNGVDDVVIPKKPIQKVIPSRITEIKPASTSDIRS 578
                    :.:::.              |:..|:|..:|.:                  ||.:| 
  Fly   547 --------RYVLRM--------------ASTGGLDAYLIRR------------------TSQLR- 570

  Fly   579 ANSSDCLGYVKPQSPMKNGTSKFNTSNGGGVQTTVGIVSSTTIKSPVSSTTKLGTVKTHRSVTWN 643
                    ..||....|:........:      .:.::.|...:..|....:|.:|         
  Fly   571 --------LTKPDVIQKDQIHSMPDPH------VLELILSNDDEYLVVGNAQLWSV--------- 612

  Fly   644 HDIPAEKLSFTMRREFDRQREETELMSQLRTIIETRLKMTLPVDIASALTDGVILC---HLANYV 705
                           .|..|...|:..:..:::..:..:.:....|:|.:..||:.   ||...|
  Fly   613 ---------------MDIDRAAREIRKEENSLLAAKRLVDIAQSFAAAESLSVIVVRFRHLGTDV 662

  Fly   706 -------------RPRSVASIHVPSPGVNKLTMARCRRNVDNFLEACRRIGVDEELICSCEDVVP 757
                         :|:.| |:.:.|..|       |:|...:...|||...:::|.:.....  |
  Fly   663 DHLIRELKQSVRKKPQPV-SLPLSSGSV-------CKRTCCDRSNACRHRAIEQEPLAGRSS--P 717

  Fly   758 QIEPQQPQLPRADDD-----------YDADVYVQDD-GSISRS--------------NDSSHLQC 796
            ..:..:..|.:..||           .:..:.:.|: .|:|.|              ..::.|..
  Fly   718 SGQSDRDLLAKDKDDEFVLAHARVLQEEQQLEMLDETESVSESVLSEEQFKCWEYMLEQNTQLLF 782

  Fly   797 SDDCNSSSNHINR---VPNALA--------------LLRTVSALIAMDENP-------------- 830
            ..:.|:.|....:   ||||:.              |:|||:........|              
  Fly   783 DKELNTISKSFTKQRTVPNAIMAATVLPERNDFTSNLMRTVTNKFISTSTPQLPQPITTSVPLGS 847

  Fly   831 YHQQL-----HHHLQLQLEQQH 847
            |||..     |....|..:|.|
  Fly   848 YHQVKQAPPGHFGSALSFQQAH 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LrchNP_609834.2 LRR_8 124..179 CDD:290566 14/59 (24%)
LRR_4 124..161 CDD:289563 10/41 (24%)
leucine-rich repeat 124..146 CDD:275380 3/23 (13%)
leucine-rich repeat 147..167 CDD:275380 8/22 (36%)
leucine-rich repeat 169..192 CDD:275380 7/22 (32%)
leucine-rich repeat 193..215 CDD:275380 7/22 (32%)
leucine-rich repeat 216..237 CDD:275380 9/27 (33%)
leucine-rich repeat 238..260 CDD:275380 7/40 (18%)
leucine-rich repeat 261..279 CDD:275380 7/19 (37%)
CH 676..756 CDD:214479 18/95 (19%)
PhlppNP_001260558.1 leucine-rich repeat 91..110 CDD:275380 4/18 (22%)
LRR_8 109..169 CDD:290566 16/60 (27%)
leucine-rich repeat 111..135 CDD:275380 4/24 (17%)
leucine-rich repeat 136..158 CDD:275380 8/21 (38%)
leucine-rich repeat 159..183 CDD:275380 3/23 (13%)
leucine-rich repeat 184..209 CDD:275380 9/26 (35%)
LRR_8 205..266 CDD:290566 19/60 (32%)
leucine-rich repeat 210..230 CDD:275380 7/19 (37%)
leucine-rich repeat 232..255 CDD:275380 7/22 (32%)
LRR_RI <256..410 CDD:238064 45/196 (23%)
leucine-rich repeat 256..276 CDD:275380 8/19 (42%)
LRR_8 279..359 CDD:290566 21/95 (22%)
leucine-rich repeat 280..303 CDD:275380 3/22 (14%)
leucine-rich repeat 304..348 CDD:275380 14/43 (33%)
leucine-rich repeat 349..372 CDD:275380 6/32 (19%)
PP2Cc 461..655 CDD:294085 33/284 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467269
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.