Sequence 1: | NP_609834.2 | Gene: | Lrch / 35041 | FlyBaseID: | FBgn0032633 | Length: | 1135 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_666276.1 | Gene: | Lrch4 / 231798 | MGIID: | 1917193 | Length: | 680 | Species: | Mus musculus |
Alignment Length: | 786 | Identity: | 244/786 - (31%) |
---|---|---|---|
Similarity: | 345/786 - (43%) | Gaps: | 202/786 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 SVAVGVGSAAGSAIGSGSASLPGSGTGSGSGIGHAGNTSSSTSSALLSHSQLTRSLERILEEAHF 75
Fly 76 SGELILTNRKLKDFPRTGTK-YSLTDTVIADLSRNRFAELPEEVTTFAFLETLLLYHNTIRSIPE 139
Fly 140 SVKQLSSLTYLDLRSNQLSSLPREICFLPLQVLLVSNNRLTSLPDELGRLDQTLTDLDASYNQLA 204
Fly 205 NLPARLGELRSLRSLSLRSNHLLYLPRELTCLSLISLDVSNNKIASLPL---EIRHMSTLVELQL 266
Fly 267 ENNPLTSPPASLCMRGLVHVFKFLETQATK------DEKGSR-------------SGGNYDGYTT 312
Fly 313 LRRAPRHNSSGNVLEASTTGSTNNQRRHQVDSGYNTSDGLDKRWSHDAPTKSKTDSPLHCVSNST 377
Fly 378 AATLPRTLPSAVHSQADLMDASLTSSTSTIVDESLTLSPTASPCKLSYAHSN----SSSNGSSPD 438
Fly 439 QDDDIMLDHQERTVHHANGRSGKGLGNIQTYKEYKEALKQQRNQEISVYKQKHPNANHSPNDDED 503
Fly 504 L------------SPSPPSISNGSSSNTLPKSIMKQNSNQIGHNGNGNGSANGNGVDDVVIP-KK 555
Fly 556 PIQKVIPSRITEIKPASTSDIRSANSSDCLGYVKPQSPMKNGTSKFNTSNGGGVQTTVGIVSSTT 620
Fly 621 IKSPVSSTTKLGTVKTHRSVTWNHDIPAEKLSFTMRREFDRQREETELMSQLRTIIETRLKMTLP 685
Fly 686 VDIASALTDGVILCHLANYVRPRSVASIHVPSPGVNKLTMARCRRNVDNFLEACRRIGVDEELIC 750
Fly 751 SCEDVV 756 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Lrch | NP_609834.2 | LRR_8 | 124..179 | CDD:290566 | 30/54 (56%) |
LRR_4 | 124..161 | CDD:289563 | 18/36 (50%) | ||
leucine-rich repeat | 124..146 | CDD:275380 | 8/21 (38%) | ||
leucine-rich repeat | 147..167 | CDD:275380 | 14/19 (74%) | ||
leucine-rich repeat | 169..192 | CDD:275380 | 10/22 (45%) | ||
leucine-rich repeat | 193..215 | CDD:275380 | 10/21 (48%) | ||
leucine-rich repeat | 216..237 | CDD:275380 | 10/20 (50%) | ||
leucine-rich repeat | 238..260 | CDD:275380 | 9/24 (38%) | ||
leucine-rich repeat | 261..279 | CDD:275380 | 8/17 (47%) | ||
CH | 676..756 | CDD:214479 | 45/79 (57%) | ||
Lrch4 | NP_666276.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..35 | 15/55 (27%) | |
LRR 1 | 43..64 | 10/20 (50%) | |||
leucine-rich repeat | 46..69 | CDD:275380 | 11/22 (50%) | ||
LRR 2 | 69..90 | 12/20 (60%) | |||
leucine-rich repeat | 70..92 | CDD:275380 | 11/21 (52%) | ||
LRR_8 | 92..148 | CDD:290566 | 30/55 (55%) | ||
LRR_4 | 92..131 | CDD:289563 | 19/38 (50%) | ||
LRR 3 | 92..114 | 7/21 (33%) | |||
leucine-rich repeat | 93..115 | CDD:275380 | 8/21 (38%) | ||
LRR_RI | <103..>245 | CDD:238064 | 66/145 (46%) | ||
LRR 4 | 115..136 | 14/20 (70%) | |||
leucine-rich repeat | 116..131 | CDD:275380 | 11/14 (79%) | ||
LRR 5 | 137..158 | 10/20 (50%) | |||
LRR_8 | 138..194 | CDD:290566 | 27/56 (48%) | ||
leucine-rich repeat | 138..160 | CDD:275380 | 10/22 (45%) | ||
LRR 6 | 160..182 | 9/21 (43%) | |||
leucine-rich repeat | 161..183 | CDD:275380 | 10/21 (48%) | ||
LRR_8 | 182..239 | CDD:290566 | 24/59 (41%) | ||
LRR 7 | 183..205 | 11/21 (52%) | |||
leucine-rich repeat | 184..204 | CDD:275380 | 10/19 (53%) | ||
leucine-rich repeat | 206..228 | CDD:275380 | 7/21 (33%) | ||
LRR 8 | 206..226 | 7/19 (37%) | |||
LRR 9 | 228..249 | 10/23 (43%) | |||
leucine-rich repeat | 229..247 | CDD:275380 | 8/20 (40%) | ||
Dishevelled | 265..405 | CDD:280528 | 31/188 (16%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 329..528 | 48/286 (17%) | |||
CH | 532..624 | CDD:278723 | 53/107 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 65 | 1.000 | Domainoid score | I10001 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0532 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 395 | 1.000 | Inparanoid score | I1953 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG46074 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000912 | |
OrthoInspector | 1 | 1.000 | - | - | otm43627 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X454 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
11 | 10.830 |