DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-IIIc and beat-IIb

DIOPT Version :10

Sequence 1:NP_724042.1 Gene:beat-IIIc / 35037 FlyBaseID:FBgn0032629 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_650613.2 Gene:beat-IIb / 42082 FlyBaseID:FBgn0038494 Length:407 Species:Drosophila melanogaster


Alignment Length:359 Identity:102/359 - (28%)
Similarity:153/359 - (42%) Gaps:86/359 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLAALFFIGTLKDFRVAGLRLTEVRI-PMYVIKGTAAQLECLYDLDGEALYSVKWYKDGNEFYRY 70
            ||..||.     ||..|.||...:.: |..|.:|.:..|.|.|.|....|||:|:|:...|||||
  Fly    83 LLLCLFC-----DFGQAALRDVNLLVEPPAVRRGQSVALRCDYQLVEAPLYSIKFYRGQMEFYRY 142

  Fly    71 VPRDMPPAQTFLLPGVNVDLHNSSDAIVTLRNVNLQSAGRFRCEVSGEAPSFQTVTEHGDMIVAY 135
            .|.:.||.:.|..||:.||.:.|:...|.:|||:...:|:|.|||:.:||.:.|.|....|.|..
  Fly   143 TPGEYPPTKVFQFPGIRVDENGSNATTVLIRNVSFGLSGQFSCEVTADAPLYSTATAFAQMQVVE 207

  Fly   136 LPDEGSPKISGGRPRYQIGDYVRVNCTAGRSKPAVKLSWQVNGEPV------EQQKLRKYDTIVS 194
            .| |..|::.....||:.||.:|.||:...|:|...|.:.:|..||      |.|.:|..|::::
  Fly   208 FP-EKRPQLFTEHSRYEPGDVLRANCSTLPSRPRADLRFTINNIPVSIPFTEETQYIRTVDSLIA 271

  Fly   195 GRDGLETSVLGLQFRVEQKHF--------------------------------------RKGNMK 221
            .|       |.|:.:::..||                                      ..|.:.
  Fly   272 SR-------LSLKLQLQATHFVAGLSAHGNGNGNGNGNGNGNGNGLANALHLGGGGGGAGGGGLI 329

  Fly   222 LKCIAELSTVYWRCNEESVEGDRPQKAPVLESRETVYASNSRADPVQGTSYRELFVTKILSLLFV 286
            |:|.|::..:|....|  :|...|||.|| .:|.|:.:         ||..|....|..      
  Fly   330 LRCTAQIGDLYQEYKE--IELGTPQKDPV-PARVTLSS---------GTGLRGFLETYF------ 376

  Fly   287 QPNAASSTASAPS----TPITPLVLLPVALAVMV 316
                  :|:|.||    :.....:.||.|||.::
  Fly   377 ------ATSSGPSNWRGSAGVVAIFLPTALAQLI 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IIIcNP_724042.1 IG_like 33..127 CDD:214653 38/93 (41%)
Ig strand B 42..46 CDD:409353 1/3 (33%)
Ig strand C 57..61 CDD:409353 2/3 (67%)
Ig strand E 96..100 CDD:409353 1/3 (33%)
Ig strand F 110..115 CDD:409353 2/4 (50%)
Ig 140..>194 CDD:472250 18/59 (31%)
Ig strand B 157..161 CDD:409353 1/3 (33%)
Ig strand C 171..174 CDD:409353 1/2 (50%)
beat-IIbNP_650613.2 IG_like 108..198 CDD:214653 37/89 (42%)

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