DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-IIIc and beat-Vb

DIOPT Version :10

Sequence 1:NP_724042.1 Gene:beat-IIIc / 35037 FlyBaseID:FBgn0032629 Length:383 Species:Drosophila melanogaster
Sequence 2:NP_731748.1 Gene:beat-Vb / 41583 FlyBaseID:FBgn0038092 Length:328 Species:Drosophila melanogaster


Alignment Length:327 Identity:89/327 - (27%)
Similarity:144/327 - (44%) Gaps:77/327 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 RVAGLRLTEVRIPMYVIKGTAAQLECLYDLDGEALYSVKWYKDGNEFYRYVPRDMPPAQTFLLPG 85
            |:..||:|::.:|..|.......|.|.||:.|..|.||||||:|.||:||.|...|....|.:.|
  Fly    20 RIQCLRVTDINVPQIVDFRDNVTLSCSYDISGHTLNSVKWYKNGKEFFRYSPLTPPTYIPFAVEG 84

  Fly    86 VNV----DLHNSSDAIVTLRNVNLQSAGRFRCEVSGEAPSFQTVTEHGDMIVAYLPDEGSPKISG 146
            |.:    :..|.|...|.|..:.::|:|.:||||||:||.||......:|.|..|| :.:|.||.
  Fly    85 VQLIDDGNECNESSCRVELNLLGVKSSGVYRCEVSGDAPHFQLTARDANMTVEALP-QNNPLISS 148

  Fly   147 GRPRYQIGDYVRVNCTAGRSKPAVKLSWQVNGEPVEQQKLRKYDTIVSGRDGLETSV-------- 203
            ....|:..|:|.|||:...|....:::|.|||..|         ::|......||::        
  Fly   149 FHSTYRFNDFVEVNCSTDFSSLFTRITWYVNGIKV---------SLVDLLPSFETTIVAHGYSMR 204

  Fly   204 -----------------LGLQFRVEQKH----FRKGNMKLKCIAELSTVYWRCNEESVEGDRPQK 247
                             |.||..::||.    .|.| ::|:|:||:                 .:
  Fly   205 RIVSQLNFYANEPRFHQLQLQKLIQQKRTISPARLG-LELRCVAEI-----------------DR 251

  Fly   248 APVLESRETVYASNSRADPVQGTSYRELFVTKILSLLFVQPNAASSTASAPSTPITPLVLLPVAL 312
            .|.|:...|::|...|.|..|...       |:::         |.:.:.|::.:..|:|:.:::
  Fly   252 YPHLQREGTMFAQLFRDDIDQKNQ-------KLIN---------SRSGATPNSQVQHLLLVAISM 300

  Fly   313 AV 314
            .:
  Fly   301 TM 302

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IIIcNP_724042.1 IG_like 33..127 CDD:214653 40/97 (41%)
Ig strand B 42..46 CDD:409353 1/3 (33%)
Ig strand C 57..61 CDD:409353 3/3 (100%)
Ig strand E 96..100 CDD:409353 1/3 (33%)
Ig strand F 110..115 CDD:409353 2/4 (50%)
Ig 140..>194 CDD:472250 15/53 (28%)
Ig strand B 157..161 CDD:409353 2/3 (67%)
Ig strand C 171..174 CDD:409353 0/2 (0%)
beat-VbNP_731748.1 Ig 24..129 CDD:472250 43/104 (41%)
Ig strand B 41..45 CDD:409353 1/3 (33%)
Ig strand C 56..60 CDD:409353 3/3 (100%)
Ig strand E 91..103 CDD:409353 3/11 (27%)
Ig strand F 113..118 CDD:409353 2/4 (50%)
Ig strand G 126..129 CDD:409353 1/2 (50%)

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