DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-IIIa and beat-IV

DIOPT Version :9

Sequence 1:NP_001188828.1 Gene:beat-IIIa / 35035 FlyBaseID:FBgn0265607 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001262876.1 Gene:beat-IV / 42778 FlyBaseID:FBgn0039089 Length:446 Species:Drosophila melanogaster


Alignment Length:241 Identity:95/241 - (39%)
Similarity:142/241 - (58%) Gaps:9/241 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 DGESLYSVKWYKDGHEIYRYVPRDKPPGQSFPLPGVNIDLRNSSDTQILLRRVTLQSSGLYRCEV 162
            :||:||::|||||..|.|||||:.:||..|:.:.||.:....|..:::|||.:||.|:|||||||
  Fly   207 EGEALYAIKWYKDNEEFYRYVPKARPPKTSYRVDGVRVIEELSDASRVLLRGLTLNSTGLYRCEV 271

  Fly   163 SGEAPAFNTVSESETMTVVVTPNHGPKITGGQPRYQIGDIVRVNCTSSPSKPVCHLSWLINGEPV 227
            |.|||.|::|.....|.:|..|..||.|.|.|.:||||:.:.:||||..|.|..||.|.:|.:|:
  Fly   272 SAEAPNFSSVQGEGRMDIVFLPRDGPHIRGQQYQYQIGEYLYLNCTSGKSHPASHLQWFVNEQPI 336

  Fly   228 QKTH-LRQYDKVVVNRDGLEMARLGLEFRVRSFHFKHGDMKLKCVAKISSLYLQSNEESVESDRQ 291
            ...| |.:|:. :|::.||..:.|||:..:...||..|||::||:|.||.:..:..:|||   .|
  Fly   337 LDEHYLHKYND-IVHKHGLITSTLGLQLPLEPRHFHEGDMRVKCLASISPVLWKGGKESV---LQ 397

  Fly   292 HRAPALESRETVAAKSSTIAAACSKLPSSLIVSLPPVLLLLLFQNW 337
            .|...:::||.:.    .:..|.....||.:.:|...::|.....|
  Fly   398 RRPGIIDNREAML----LVKGAAGHSESSFLRTLTIAIILARTGQW 439

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IIIaNP_001188828.1 Ig 87..183 CDD:299845 42/84 (50%)
IG_like 88..182 CDD:214653 41/83 (49%)
Ig 188..>227 CDD:299845 18/38 (47%)
beat-IVNP_001262876.1 Ig <212..285 CDD:299845 37/72 (51%)
Ig 314..>362 CDD:299845 19/48 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000798
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21261
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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