DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment beat-IIIa and beat-IIb

DIOPT Version :9

Sequence 1:NP_001188828.1 Gene:beat-IIIa / 35035 FlyBaseID:FBgn0265607 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_650613.2 Gene:beat-IIb / 42082 FlyBaseID:FBgn0038494 Length:407 Species:Drosophila melanogaster


Alignment Length:396 Identity:105/396 - (26%)
Similarity:166/396 - (41%) Gaps:102/396 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 KTEHHQCHQQLRMNMEQQDGTPGARKSATA------RTAAT-------------SLQIWYILHVI 62
            |.|:.:.|..:         .|.|..:.||      ||..|             ::..|.:|  :
  Fly    32 KLENAEMHSHM---------LPSAEIATTAVRRCCCRTKITRSNSSNYSCNYGSNVIQWLLL--L 85

  Fly    63 LVLIDISSSLTMTEVKI---PNHIMRLKSATLGCRYALDGESLYSVKWYKDGHEIYRYVPRDKPP 124
            .:..|...: .:.:|.:   |..:.|.:|..|.|.|.|....|||:|:|:...|.|||.|.:.||
  Fly    86 CLFCDFGQA-ALRDVNLLVEPPAVRRGQSVALRCDYQLVEAPLYSIKFYRGQMEFYRYTPGEYPP 149

  Fly   125 GQSFPLPGVNIDLRNSSDTQILLRRVTLQSSGLYRCEVSGEAPAFNTVSESETMTVVVTPNHGPK 189
            .:.|..||:.:|...|:.|.:|:|.|:...||.:.|||:.:||.::|.:....|.||..|...|:
  Fly   150 TKVFQFPGIRVDENGSNATTVLIRNVSFGLSGQFSCEVTADAPLYSTATAFAQMQVVEFPEKRPQ 214

  Fly   190 ITGGQPRYQIGDIVRVNCTSSPSKPVCHLSWLINGEPVQ--KTHLRQYDKVVVNRDGLEMARLGL 252
            :.....||:.||::|.||::.||:|...|.:.||..||.  .|...||.:.|   |.|..:||.|
  Fly   215 LFTEHSRYEPGDVLRANCSTLPSRPRADLRFTINNIPVSIPFTEETQYIRTV---DSLIASRLSL 276

  Fly   253 EFRVRSFHF-----KHGD---------------------------------MKLKCVAKISSLYL 279
            :.::::.||     .||:                                 :.|:|.|:|..||.
  Fly   277 KLQLQATHFVAGLSAHGNGNGNGNGNGNGNGNGLANALHLGGGGGGAGGGGLILRCTAQIGDLYQ 341

  Fly   280 QSNEESVESDRQHRAPA---LES-------RETVAAKSSTIAAACSKLPSS-------LIVSLPP 327
            :..|..:.:.::...||   |.|       .||..|.||.        ||:       :.:.||.
  Fly   342 EYKEIELGTPQKDPVPARVTLSSGTGLRGFLETYFATSSG--------PSNWRGSAGVVAIFLPT 398

  Fly   328 VLLLLL 333
            .|..|:
  Fly   399 ALAQLI 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IIIaNP_001188828.1 Ig 87..183 CDD:299845 37/95 (39%)
IG_like 88..182 CDD:214653 36/93 (39%)
Ig 188..>227 CDD:299845 14/38 (37%)
beat-IIbNP_650613.2 IG_like 108..198 CDD:214653 35/89 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45451069
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000798
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21261
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

Return to query results.
Submit another query.