DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-IIIa and beat-Va

DIOPT Version :10

Sequence 1:NP_609829.5 Gene:beat-IIIa / 35035 FlyBaseID:FBgn0265607 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_650233.3 Gene:beat-Va / 41578 FlyBaseID:FBgn0038087 Length:300 Species:Drosophila melanogaster


Alignment Length:312 Identity:87/312 - (27%)
Similarity:140/312 - (44%) Gaps:58/312 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 WYILHVILVLID--ISSSLTMTEVKIPNHIMRLKSATLGCRYALDGESLYSVKWYKDGHEIYRYV 118
            |.:...|.:|||  |:.:|.:|::.:|..:....:.||.|.|.:.|.:|.|||||||..|.:||.
  Fly     5 WLMFLFIALLIDYPIAYALFVTDISVPEIVDFRDNVTLSCSYDMRGHTLNSVKWYKDHEEFFRYS 69

  Fly   119 PRDKPPGQSFPLPGVNI----DLRNSSDTQILLRRVTLQSSGLYRCEVSGEAPAFNTVSESETMT 179
            |...|...:|.:.|:.:    .:.|.|..::.|.....:|:|||:|||||:||.|....:::.||
  Fly    70 PLTSPIYMTFDVAGLQVLEGKYVCNESSCRLDLSLQGAKSTGLYKCEVSGDAPHFKLADKADNMT 134

  Fly   180 VVVTPNHGPKITGGQPRYQIGDIVRVNCTSSPSKPVCHLSWLINGE--------PVQKTHLRQYD 236
            |...|.:.|.|......|::.:.::..|.|..|.....|:|.||||        |...|.|..:|
  Fly   135 VAALPQNDPLIESFNSMYRMEEYLKATCISDFSSLPTRLTWYINGEQPLLGELYPTTDTSLAAHD 199

  Fly   237 KVVVNRDGLEMARLGLEFRVRSFHFKHGD--MKLKCVAKISSLYLQSNEESVESDRQHRAPALES 299
            .|      |...||.::|.::...|....  ::|||||:|.:.                 |.|..
  Fly   200 YV------LRRQRLQVQFFLQGQRFFQAGKILELKCVAEIENY-----------------PELRR 241

  Fly   300 RETVAAKSSTIAAACSKLP-------------------SSLIVSLPPVLLLL 332
            .:|::|..|......:::|                   :|||.:....:||:
  Fly   242 EKTLSASLSQYDNFNNQMPLRHANANSGSAQRSILCGRTSLISAFLAAILLI 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IIIaNP_609829.5 V-set 87..183 CDD:462230 38/99 (38%)
Ig 188..>227 CDD:472250 12/46 (26%)
beat-VaNP_650233.3 None

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