DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-IIIa and beat-IIIc

DIOPT Version :10

Sequence 1:NP_609829.5 Gene:beat-IIIa / 35035 FlyBaseID:FBgn0265607 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_724042.1 Gene:beat-IIIc / 35037 FlyBaseID:FBgn0032629 Length:383 Species:Drosophila melanogaster


Alignment Length:294 Identity:154/294 - (52%)
Similarity:199/294 - (67%) Gaps:30/294 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 SSLTMTEVKIPNHIMRLKSATLGCRYALDGESLYSVKWYKDGHEIYRYVPRDKPPGQSFPLPGVN 134
            :.|.:|||:||.::::..:|.|.|.|.||||:||||||||||:|.|||||||.||.|:|.|||||
  Fly    23 AGLRLTEVRIPMYVIKGTAAQLECLYDLDGEALYSVKWYKDGNEFYRYVPRDMPPAQTFLLPGVN 87

  Fly   135 IDLRNSSDTQILLRRVTLQSSGLYRCEVSGEAPAFNTVSESETMTVVVTPNHG-PKITGGQPRYQ 198
            :||.||||..:.||.|.|||:|.:|||||||||:|.||:|...|.|...|:.| |||:||:||||
  Fly    88 VDLHNSSDAIVTLRNVNLQSAGRFRCEVSGEAPSFQTVTEHGDMIVAYLPDEGSPKISGGRPRYQ 152

  Fly   199 IGDIVRVNCTSSPSKPVCHLSWLINGEPVQKTHLRQYDKVVVNRDGLEMARLGLEFRVRSFHFKH 263
            |||.||||||:..|||...|||.:|||||::..||:||.:|..|||||.:.|||:|||...||:.
  Fly   153 IGDYVRVNCTAGRSKPAVKLSWQVNGEPVEQQKLRKYDTIVSGRDGLETSVLGLQFRVEQKHFRK 217

  Fly   264 GDMKLKCVAKISSLYLQSNEESVESDRQHRAPALESRETVAAKSS-------------------- 308
            |:|||||:|::|::|.:.||||||.||..:||.|||||||.|.:|                    
  Fly   218 GNMKLKCIAELSTVYWRCNEESVEGDRPQKAPVLESRETVYASNSRADPVQGTSYRELFVTKILS 282

  Fly   309 ------TIAAACSKLPSSLI---VSLPPVLLLLL 333
                  ..|::.:..||:.|   |.||..|.:::
  Fly   283 LLFVQPNAASSTASAPSTPITPLVLLPVALAVMV 316

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IIIaNP_609829.5 V-set 87..183 CDD:462230 63/95 (66%)
Ig 188..>227 CDD:472250 27/38 (71%)
beat-IIIcNP_724042.1 IG_like 33..127 CDD:214653 61/93 (66%)
Ig strand B 42..46 CDD:409353 2/3 (67%)
Ig strand C 57..61 CDD:409353 3/3 (100%)
Ig strand E 96..100 CDD:409353 0/3 (0%)
Ig strand F 110..115 CDD:409353 2/4 (50%)
Ig 140..>194 CDD:472250 34/53 (64%)
Ig strand B 157..161 CDD:409353 3/3 (100%)
Ig strand C 171..174 CDD:409353 1/2 (50%)

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