DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-IIIa and beat-IIIb

DIOPT Version :10

Sequence 1:NP_609829.5 Gene:beat-IIIa / 35035 FlyBaseID:FBgn0265607 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_788071.3 Gene:beat-IIIb / 35031 FlyBaseID:FBgn0053179 Length:404 Species:Drosophila melanogaster


Alignment Length:251 Identity:175/251 - (69%)
Similarity:207/251 - (82%) Gaps:2/251 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 LHVILVLIDISS--SLTMTEVKIPNHIMRLKSATLGCRYALDGESLYSVKWYKDGHEIYRYVPRD 121
            |.::|:.:...|  .|||||:|||.||||.:.|.|||::.|||||||||||||||.|.|||||||
  Fly    16 LFILLLQLCFESVECLTMTEIKIPKHIMRHEDAVLGCKFDLDGESLYSVKWYKDGFEFYRYVPRD 80

  Fly   122 KPPGQSFPLPGVNIDLRNSSDTQILLRRVTLQSSGLYRCEVSGEAPAFNTVSESETMTVVVTPNH 186
            .||||.||||||:::|:||:|..::||.|:|||:|.||||||||||:|.|||..|.|.|||||.|
  Fly    81 MPPGQVFPLPGVDVELQNSTDVVVVLRSVSLQSTGRYRCEVSGEAPSFQTVSGHEDMIVVVTPKH 145

  Fly   187 GPKITGGQPRYQIGDIVRVNCTSSPSKPVCHLSWLINGEPVQKTHLRQYDKVVVNRDGLEMARLG 251
            ||:||||||||||||:|||||||:.|:|||||||||||....::.||.|:.::|.|:|||:||||
  Fly   146 GPQITGGQPRYQIGDMVRVNCTSAASRPVCHLSWLINGMHANRSLLRPYEPLIVGREGLEVARLG 210

  Fly   252 LEFRVRSFHFKHGDMKLKCVAKISSLYLQSNEESVESDRQHRAPALESRETVAAKS 307
            ||||||. |||||||||||||||||:|.||||||||||:..|.|.|||||||.:||
  Fly   211 LEFRVRGXHFKHGDMKLKCVAKISSVYWQSNEESVESDKHQRIPVLESRETVMSKS 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IIIaNP_609829.5 V-set 87..183 CDD:462230 66/95 (69%)
Ig 188..>227 CDD:472250 32/38 (84%)
beat-IIIbNP_788071.3 None

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