DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-IIIa and beat-Ia

DIOPT Version :10

Sequence 1:NP_609829.5 Gene:beat-IIIa / 35035 FlyBaseID:FBgn0265607 Length:343 Species:Drosophila melanogaster
Sequence 2:NP_001285975.1 Gene:beat-Ia / 34947 FlyBaseID:FBgn0013433 Length:437 Species:Drosophila melanogaster


Alignment Length:244 Identity:90/244 - (36%)
Similarity:157/244 - (64%) Gaps:8/244 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 RTAATSLQIWYILHVILVLIDISSSLTMTEVKIPNHIMRLKSATLGCRYALDGESLYSVKWYKDG 111
            :||.|::       ::.:.::::::|....|::|:.:.|.:.|.|.|.|.::.:|||||||||..
  Fly     9 QTALTTI-------LLALTLEMTAALRDVRVRVPHAVRRSEKAILKCFYDIEDDSLYSVKWYKGR 66

  Fly   112 HEIYRYVPRDKPPGQSFPLPGVNIDLRNSSDTQILLRRVTLQSSGLYRCEVSGEAPAFNTVSESE 176
            .|.|||.|::.||.:.|..|||.:...:|:::|::|..||:.:||.|.||||.:||:|:|:..:.
  Fly    67 REFYRYTPKETPPMKVFHFPGVKVRRVSSNESQVVLDAVTMATSGKYSCEVSADAPSFHTLIAAA 131

  Fly   177 TMTVVVTPNHGPKITGGQPRYQIGDIVRVNCTSSPSKPVCHLSWLINGEPVQKTHLRQYDKVVVN 241
            .:.|:.||::.|.|||.:|||::|||:|.||||..|:|..:|:|.:|.|.|....:|.:..:...
  Fly   132 ELEVIETPHNAPFITGIRPRYRVGDILRGNCTSRHSRPAANLTWTVNNEEVNPALVRHHKILRDA 196

  Fly   242 RDGLEMARLGLEFRVRSFHFKHGDMKLKCVAKISSLYLQSNEESV-ESD 289
            |:.:|.|.:|:.|.|...||.:|.:||:|.|::..:|.::.|:.: |:|
  Fly   197 RNDMETAVVGIHFVVTDQHFDNGKLKLRCSAQLHDVYWKTTEKIILETD 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IIIaNP_609829.5 V-set 87..183 CDD:462230 41/95 (43%)
Ig 188..>227 CDD:472250 21/38 (55%)
beat-IaNP_001285975.1 Ig 42..118 CDD:472250 34/75 (45%)
Ig strand B 44..48 CDD:409353 2/3 (67%)
Ig strand C 59..63 CDD:409353 3/3 (100%)
Ig strand E 98..102 CDD:409353 1/3 (33%)
Ig strand F 112..117 CDD:409353 2/4 (50%)
Ig 143..240 CDD:472250 38/96 (40%)
Ig strand B 158..162 CDD:409353 1/3 (33%)
Ig strand C 172..176 CDD:409353 1/3 (33%)
Ig strand E 205..209 CDD:409353 1/3 (33%)
Ig strand F 222..227 CDD:409353 3/4 (75%)
Ig strand G 235..238 CDD:409353 0/2 (0%)

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