DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-IIIb and beat-VI

DIOPT Version :9

Sequence 1:NP_788071.3 Gene:beat-IIIb / 35031 FlyBaseID:FBgn0053179 Length:404 Species:Drosophila melanogaster
Sequence 2:NP_001263035.1 Gene:beat-VI / 43377 FlyBaseID:FBgn0039584 Length:332 Species:Drosophila melanogaster


Alignment Length:253 Identity:76/253 - (30%)
Similarity:118/253 - (46%) Gaps:35/253 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 CRYSLAYGAL------FILLLQLCFESVECLTMTEIKIPKHIMRHEDAVLGCKFDLDGESLYSVK 65
            ||....:.|.      :|::.:|.. |..||...:|.:|:.::....|.|.|::||:..:||:|:
  Fly    23 CRPGALHTAFNMLALSWIIISELLL-SAHCLKDLKIFVPEAVLMGNAATLSCQYDLEQAALYAVR 86

  Fly    66 WYKDGFEFYRYVPRDMPPGQVFPLPGVDVELQNSTDVVVVLRSVSLQSTGRYRCEVSGEAPSFQT 130
            ||....||||||||:..|..||.:.|::|:|.||....|.|:.|:.:.:|.|:||||.:||.|.|
  Fly    87 WYFGQEEFYRYVPREAKPTFVFAVAGINVDLANSDATSVTLKGVTRELSGSYQCEVSEDAPLFHT 151

  Fly   131 VSGHEDMIVVVTPKHGPQITGGQPRYQIGDMVRVNCTSAASRPVCHLSWLINGMHANRSLLR--- 192
            ......|.|:..||..|.:...:....:.|..:..||...|.|..:::|.|||....|:.|:   
  Fly   152 EIRSAHMQVIELPKDDPVMQVDKKVIGVNDNFKAVCTVGPSYPPANITWSINGNQIRRTPLQRIS 216

  Fly   193 --PYE-----------PLIVGREGLEVARLGLEFRVRGXHFKHGDMKLKCVAKISSVY 237
              .||           |.....:|.        |..:..|    .:.|:||..|..:|
  Fly   217 QDTYEGSTTYSSLDIYPNSQALQGF--------FETKYQH----SVNLQCVVTIRHMY 262

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
beat-IIIbNP_788071.3 None
beat-VINP_001263035.1 Ig 66..142 CDD:416386 32/75 (43%)
Ig strand B 67..76 CDD:409353 3/8 (38%)
CDR1 76..83 CDD:409353 2/6 (33%)
Ig strand C 83..91 CDD:409353 4/7 (57%)
FR2 84..91 CDD:409353 3/6 (50%)
CDR2 94..108 CDD:409353 8/13 (62%)
Ig strand C' 94..99 CDD:409353 4/4 (100%)
Ig strand C' 102..104 CDD:409353 0/1 (0%)
FR3 109..143 CDD:409353 12/33 (36%)
Ig strand D 117..121 CDD:409353 2/3 (67%)
Ig strand E 123..127 CDD:409353 1/3 (33%)
Ig strand F 136..144 CDD:409353 5/7 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000798
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21261
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.010

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