DRSC/TRiP Functional Genomics Resources

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Protein Alignment beat-IIIb and sirpb1

DIOPT Version :10

Sequence 1:NP_788071.3 Gene:beat-IIIb / 35031 FlyBaseID:FBgn0053179 Length:404 Species:Drosophila melanogaster
Sequence 2:XP_031748713.1 Gene:sirpb1 / 100496188 XenbaseID:XB-GENE-29083055 Length:852 Species:Xenopus tropicalis


Alignment Length:429 Identity:81/429 - (18%)
Similarity:133/429 - (31%) Gaps:173/429 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 IMRHEDAVLGCKFDLDGE--------SLYSVKWYKDGF-----------------EFY------- 74
            :..|:|.|:.|||..||:        |..|.| .||..                 |||       
 Frog   460 VSAHKDMVVFCKFVCDGKAKEEQLHCSFISAK-PKDYIKLSLSDSGEVLSRLTLQEFYPRGIQIR 523

  Fly    75 ----------------RYVPRDMPP----------GQVFPLPGVDVEL----QNSTD-------- 101
                            |:.|.....          ||:|..||..|.:    |:||.        
 Frog   524 WSCGVGHYQELESINERFTPNSNYTYNTESECKILGQLFTDPGFKVRVTWNQQSSTGQGSREFSA 588

  Fly   102 -----------VVVVLRSVSLQSTGRYRCEVSGEAPSFQTV-------SGHEDMIVVVTPKHGPQ 148
                       ..::..::...|.||::||:.|..|....|       .|.|  :..|:|..   
 Frog   589 RDPEFPWCPWMEEIIKPALKHNSEGRFQCEIRGYFPKALEVKWLRREAGGQE--LFSVSPSE--- 648

  Fly   149 ITGGQPRYQIGDMVR-------VNCTSA-----------ASRPVCHLSWLINGMHANRSLLRPYE 195
                  :|:|.:|.:       .:||:|           .:..:|.:.      |.:..     |
 Frog   649 ------KYKIPEMEQKKEADGTFSCTAALIVSVSGKSDNGAEFICRVG------HPSLG-----E 696

  Fly   196 PL-----IVGREGLEVARLGLEFRVRGXHFKHGDMKLKCVAKISSVY-------WQSNEESVESD 248
            ||     .:...|:.|.|...:   ||.:.         :.:|...|       ||..|:  |..
 Frog   697 PLDRSTGALSVTGVPVVRSCTQ---RGKYI---------IMEIDQFYPQDIGVTWQRAEK--EPK 747

  Fly   249 KHQRIPVLES----------RETVMSKSRQSMDKAQLEDKQLKKSRRPAAATSAAAAAAAAAASS 303
            .::.||.:::          |.|.:.:....||:....|... .:|....|.:............
 Frog   748 DYKPIPDVQNKLYQNSDGTYRLTSICEGMGLMDRMNPNDFYF-TARVQHEALNPPIQKEFLRKEG 811

  Fly   304 SASRATVAPFGAMWG--SSVPWSRILASKSIARISLYAL 340
            :...|.::|. .|||  ..:|:::|    |:....||.|
 Frog   812 NPQTAVLSPI-HMWGYLGFLPFTQI----SVHSTYLYFL 845

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
beat-IIIbNP_788071.3 None
sirpb1XP_031748713.1 V-set 30..133 CDD:462230
C1-set 153..220 CDD:462221
Ig 234..315 CDD:472250
Ig strand B 251..255 CDD:409353
Ig strand C 266..270 CDD:409353
Ig strand E 291..295 CDD:409353
Ig strand F 302..310 CDD:409353
IgC1 <617..702 CDD:409354 20/106 (19%)
Ig strand C 626..632 CDD:409354 1/5 (20%)