Protein Alignment CG12288 and MIP6

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_011879.1
• Gene: MIP6 / 856408
• SGDID: S000001057
• Length: 659
• Species: Saccharomyces cerevisiae
• Alignment Length: 454
• Identity: 87/454 - (19%)
• Similarity: 148/454 - (32%)
• Gaps: 173/454 - (38%)

  Fly    29 VTKKSKTKPKKKTVKVPKDEVKAAVQESPKKLSAKDLAKIEKKKAKKQAQKLK----KQQNKLAP 89
            ::..||..|:..:...|.|  |.|.|:|.|.:||:.|.:::....|....|||    |::|.|..
Yeast    12 ISLNSKQNPRSISKSCPND--KDARQKSFKTISAQALVRVQGAGYKLGDVKLKDAEVKEKNSLKK 74

  Fly    90 KEIKT---EPEAQVKVESKATKKEKVEKEPTTAPNEKPKGKVSKKAKANANNKDEEGVKRIRNPA 151
            .:.|.   |.:.|.:|..|...|..|:|            .::|.:|.|
Yeast    75 YDCKNATQEKKEQEQVFEKTVAKGSVQK------------YITKTSKTN---------------- 111

  Fly   152 EEASTVFVGNLPINTKRVQLVKLFQPYGLVQSIRL-------RTAG-GKQLFKHKQ--------- 199
                ::|:|||........|.|:|:.|...:|.::       ::.| |...||.|.
Yeast   112 ----SLFIGNLKSTVTEEMLRKIFKRYQSFESAKVCRDFLTKKSLGYGYLNFKDKNDAESARKEF 172

  Fly   200 ---------------------RKVAGSLNAY---VVLEKPEIAQQALAL---------------- 224
                                 ||..|: |.:   :.||.|::..::..|
Yeast   173 NYTVFFGQEVKIMPSMKNTLFRKNIGT-NVFFSNLPLENPQLTTRSFYLIMIEYGNVLSCLLERR 236

  Fly   225 ---------------------NGSEFKEN----------HLRVTPASMAEKFGQAKD-------- 250
                                 |..||..|          .:|..|.....|.....|
Yeast   237 KNIGFVYFDNDISARNVIKKYNNQEFFGNKIICGLHFDKEVRTRPEFTKRKKMIGSDIVIEDELL 301

  Fly   251 --KQPSDKDAKRTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAV 313
              ...||....:||.|.:|....|:|::.:.||:.|.|..: .:.:........|:|.::..:..
Yeast   302 ASNNLSDNARSKTILVKNLPSDTTQEEVLDYFSTIGPIKSV-FISEKQANTPHKAFVTYKNEEES 365

  Fly   314 GLALE-LNQTLL----------DDRPINVERYQVKKLGAKQVRDAAAASAASKTSSKTKAKNQN 366
            ..|.: ||:|:.          .|:|::      .::|               |:.|||...:|
Yeast   366 KKAQKCLNKTIFKNHTIWVGPGKDKPVH------NQIG---------------TNKKTKVYLKN 408

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	27/169 (16%)
		RRM_SF	261..332	CDD:302621	18/81 (22%)
MIP6	NP_011879.1	RRM	8..>187	CDD:223796	45/208 (22%)
		RRM1_PES4_MIP6	111..190	CDD:410180	15/98 (15%)
		RRM2_PES4_MIP6	200..275	CDD:410181	9/74 (12%)
		RRM3_PES4_MIP6	313..385	CDD:410182	16/72 (22%)
		RRM4_PES4_MIP6	400..478	CDD:410183	4/9 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910