Protein Alignment CG12288 and AT1G60000

DIOPT Version :10

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_176208.1
• Gene: AT1G60000 / 842294
• AraportID: AT1G60000
• Length: 258
• Species: Arabidopsis thaliana
• Alignment Length: 213
• Identity: 59/213 - (27%)
• Similarity: 97/213 - (45%)
• Gaps: 25/213 - (11%)

  Fly   133 KANANNKDEEGVKRIRNPAEEAST-VFVGNLPINTKRVQLVKLFQPYG---LVQSIRLRTAGGKQ 193
            |.....|| :|...:.:|....:| ::.||||.|.....|.::.|.:.   ||:.:..|..|..:
plant    63 KLEEEEKD-DGASAVLDPPAAVNTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSR 126

  Fly   194 LFKHKQRKVAGSLNAYVVLEKPEIAQQAL-ALNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKD 257
            .|            |:|.:...|.....: .|:|:|:....|:|   :.|:|  ...:|:|...:
plant   127 GF------------AFVTMSNVEDCNIIIDNLDGTEYLGRALKV---NFADK--PKPNKEPLYPE 174

  Fly   258 AKRTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKG-CKGVAYVCFQKPDAVGLALE-LN 320
            .:..:|||:|.::.|.|.|...|..||::...|.:.|||.| .:|..:||:.....:..||| |:
plant   175 TEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESLD 239

  Fly   321 QTLLDDRPINVERYQVKK 338
            ...|:.|.|.|...|.||
plant   240 GFELEGRAIRVNLAQGKK 257

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	20/85 (24%)
		RRM_SF	261..332	CDD:473069	25/72 (35%)
AT1G60000	NP_176208.1	RRM_SF	86..165	CDD:473069	22/95 (23%)
		RRM	178..257	CDD:440488	27/78 (35%)