Protein Alignment CG12288 and PAB8

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_001185184.1
• Gene: PAB8 / 841399
• AraportID: AT1G49760
• Length: 671
• Species: Arabidopsis thaliana
• Alignment Length: 262
• Identity: 65/262 - (24%)
• Similarity: 109/262 - (41%)
• Gaps: 44/262 - (16%)

  Fly   148 RNPAEEA---STVFVGNLPINTKRVQLVKLFQPYGLVQS-IRLRTAGGKQLFKHKQRKVAGSLNA 208
            |:|:.|.   :.|:|.||..:....:|.|:|..:|:..| :.:|...||.       |..|.:|
plant   214 RDPSGEKVKFTNVYVKNLSESLSDEELNKVFGEFGVTTSCVIMRDGEGKS-------KGFGFVN- 270

  Fly   209 YVVLEKPEIAQQAL-ALNGSEFKENHLRVTPA--------SMAEKFGQAKDKQPSDKDAKRTIFV 264
               .|..:.|.:|: ||||..|.:....|..|        .:.:||.|:. |:.:||.....::|
plant   271 ---FENSDDAARAVDALNGKTFDDKEWFVGKAQKKSERETELKQKFEQSL-KEAADKSQGSNLYV 331

  Fly   265 GSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLAL-ELNQTLLDDRP 328
            .:|..|.|:::|||.|:..|.|...:.::|.....:|..:|.|..|:....|: |:|..::..:|
plant   332 KNLDESVTDDKLREHFAPFGTITSCKVMRDPSGVSRGSGFVAFSTPEEATRAITEMNGKMIVTKP 396

  Fly   329 INVERYQVKKLGAKQVRDAAAASAASKTSSKTKAKNQNSAGAKKRLDKKKGKENGSLKKEGAPTG 393
            :.|                  |.|..|...|.:.:.|.|......:....|.........|.|.|
plant   397 LYV------------------ALAQRKEDRKARLQAQFSQMRPVNMPPAVGPRMQMYPPGGPPMG 443

  Fly   394 QK 395
            |:
plant   444 QQ 445

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	23/83 (28%)
		RRM_SF	261..332	CDD:302621	19/71 (27%)
PAB8	NP_001185184.1	PABP-1234	46..646	CDD:130689	65/262 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910