DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12288 and CP31B

DIOPT Version :10

Sequence 1:NP_609822.1 Gene:CG12288 / 35027 FlyBaseID:FBgn0032620 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_199836.1 Gene:CP31B / 835090 AraportID:AT5G50250 Length:289 Species:Arabidopsis thaliana


Alignment Length:195 Identity:54/195 - (27%)
Similarity:90/195 - (46%) Gaps:15/195 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   139 KDEEGVKRIRNPAEEASTVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVA 203
            :.|:|| ....|.|||. :||||||.:.....|..||:..|.|:.       .:.::.....:..
plant    99 ESEDGV-GFPEPPEEAK-LFVGNLPYDVDSQALAMLFEQAGTVEI-------SEVIYNRDTDQSR 154

  Fly   204 GSLNAYVVLEKPEIAQQALALNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLK 268
            |.  .:|.:...|.|::|:....| |:.|..|:| .:.|...|...::||...||...|:||:|.
plant   155 GF--GFVTMSTVEEAEKAVEKFNS-FEVNGRRLT-VNRAAPRGSRPERQPRVYDAAFRIYVGNLP 215

  Fly   269 YSATEEQLREIFSSCGEIDYIRCLQDGDKG-CKGVAYVCFQKPDAVGLAL-ELNQTLLDDRPINV 331
            :.....:|..:||..|::...|.:.|.:.| .:|..:|.....:.|.:|: .|:...|:.|.|.|
plant   216 WDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKV 280

  Fly   332  331
            plant   281  280

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12288NP_609822.1 RRM1_RBM34 156..237 CDD:409828 20/80 (25%)
RRM_SF 261..332 CDD:473069 20/73 (27%)
CP31BNP_199836.1 RRM_SF 114..193 CDD:473069 22/90 (24%)
RRM 208..289 CDD:440488 20/73 (27%)

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