Protein Alignment CG12288 and ATRBP45C

DIOPT Version :10

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_567764.1
• Gene: ATRBP45C / 828808
• AraportID: AT4G27000
• Length: 415
• Species: Arabidopsis thaliana
• Alignment Length: 282
• Identity: 62/282 - (21%)
• Similarity: 107/282 - (37%)
• Gaps: 55/282 - (19%)

  Fly   156 TVFVGNLPINTKRVQLVKLFQP-YGLVQSIRL---RTAGGKQLF-------KHKQRKVAGSLNAY 209
            |||||:|..:.....|.:.|:. |..|:..::   ||.|..:.:       :.:|.:....:|..
plant   174 TVFVGDLAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQ 238

  Fly   210 VVLEKPEIAQQALALNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEE 274
            ....:|       ...|....:..|.:.|||.....|.:.:..|::    .|||||::..|.||:
plant   239 YCSSRP-------MRTGPAANKKPLTMQPASYQNTQGNSGESDPTN----TTIFVGAVDQSVTED 292

  Fly   275 QLREIFSSCGEIDYIRCLQDGDKGCKGVAY---VCFQKPDAVGLALELNQTLLDDRPINVERYQV 336
            .|:.:|...||:.:::.  ...|.|..|.|   .|.::..:|     ||.|
plant   293 DLKSVFGQFGELVHVKI--PAGKRCGFVQYANRACAEQALSV-----LNGT-------------- 336

  Fly   337 KKLGAKQVRDAAAASAASKTSSKTKAKNQNSAGAKKRLDKKKGKENGSLKKEG-APTGQKKKSEY 400
             :||.:.:|.:...|.::|.:...:|:.....|       ..|......:..| ||..|...:.|
plant   337 -QLGGQSIRLSWGRSPSNKQTQPDQAQYGGGGG-------YYGYPPQGYEAYGYAPPPQDPNAYY 393

  Fly   401 RGVKVDGIKKAKKPKKKSNDQQ 422
            .|....|....::|......||
plant   394 GGYAGGGYGNYQQPGGYQQQQQ 415

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	18/91 (20%)
		RRM_SF	261..332	CDD:473069	21/73 (29%)
ATRBP45C	NP_567764.1	RRM1_SECp43_like	81..158	CDD:409780
		RRM2_SECp43_like	172..251	CDD:409781	17/83 (20%)
		RRM_SF	277..348	CDD:473069	24/96 (25%)