Protein Alignment CG12288 and SR34b

DIOPT Version :10

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_001328194.1
• Gene: SR34b / 828027
• AraportID: AT4G02430
• Length: 292
• Species: Arabidopsis thaliana
• Alignment Length: 292
• Identity: 60/292 - (20%)
• Similarity: 111/292 - (38%)
• Gaps: 63/292 - (21%)

  Fly   151 AEEASTVFVGNLPINTKRVQLVKLFQPYGLVQSIRL----RTAGGKQLFKHKQRKVAGSLNAYVV 211
            :..:.|::|||||.:.:..::..||..||.|..|.|    |..|                .|:|.
plant     3 SRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPG----------------YAFVE 51

  Fly   212 LEKPEIAQQAL-ALNGSEFKENHLRVTPASMAEKF--------------------GQAKDKQPSD 255
            .|....|..|: ..:|.:|..:||||..|....:.                    |..:::.||.
plant    52 FEDARDADDAIYGRDGYDFDGHHLRVELAHGGRRSSHDARGSYSGRGRGGRGGGDGGGRERGPSR 116

  Fly   256 KDAKRTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVA-YVCFQKPDAVGLALEL 319
            :...|.: |..|..||:.:.|::.....||:.:.:..:|| :|..|:. |..:          |.
plant   117 RSEYRVV-VSGLPSSASWQDLKDHMRKGGEVCFSQVFRDG-RGTTGIVDYTSY----------ED 169

  Fly   320 NQTLLDDRP---------INVERYQVKKLGAKQVRDAAAASAASKTSSKTKAKNQNSAGAKKRLD 375
            .:..|||..         :.|..|..::......|..:.:.:.|:..|.:::::::.:.:|.|..
plant   170 MKYALDDTEFRNAFSHEYVRVREYDSRRDSRSPSRGRSYSKSRSRGRSPSRSRSRSRSRSKSRSP 234

  Fly   376 KKKGKENGSLKKEGAPTGQKKKSEYRGVKVDG 407
            |.|.......|........:.:|:.|.:...|
plant   235 KAKSLRRSPAKSTSRSPRSRSRSKSRSLSPRG 266

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	25/85 (29%)
		RRM_SF	261..332	CDD:473069	16/80 (20%)
SR34b	NP_001328194.1	RRM1_SF2_plant_like	8..79	CDD:410011	26/86 (30%)
		RRM2_SF2_plant_like	120..192	CDD:410014	18/83 (22%)