DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12288 and PHIP1

DIOPT Version :10

Sequence 1:NP_609822.1 Gene:CG12288 / 35027 FlyBaseID:FBgn0032620 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_191094.1 Gene:PHIP1 / 824700 AraportID:AT3G55340 Length:597 Species:Arabidopsis thaliana


Alignment Length:450 Identity:99/450 - (22%)
Similarity:184/450 - (40%) Gaps:121/450 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 AKESEKAELKPIKKEPGVVEDGKV-----TKKSKTKPKKKTVKVPKDEVKAAVQESPKKLSAKDL 65
            :|..::...:...:|...:.:.:|     ::|:.||.|||.                |:..|.::
plant    48 SKREKRRNCETFAREDDEIRENEVGNGGSSEKTDTKIKKKR----------------KRDDAVEV 96

  Fly    66 AKIEKKKAKKQAQKLKKQQNKLAPKEIKTEPEAQVKVESKATKKEKVEKEPTTAPNEKPKGKVSK 130
            .::|..:..|:.||.:|::||                  |..||.||.|.|..|    .:|.|.:
plant    97 DELEGDEGTKEEQKPQKKKNK------------------KKKKKRKVNKTPKKA----EEGNVEE 139

  Fly   131 KAK-----ANANNKDEEGVKRIRNPAEEASTVFVGNLPINTKRVQLVKLFQPYGLVQSI--RLRT 188
            |.|     .|.:||:|:||        ..:.::||.:|..:...::...|:..|::..:  ::|.
plant   140 KVKVEEIEVNTDNKEEDGV--------VPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRP 196

  Fly   189 AGGKQLFKHKQRKVAGSLNAYVVLEKPEIAQQALALNGSEFKENHLRV-------TPASMAEKFG 246
            ..|           |.|..|::..:..:.|::|||.:.:...:.:|.:       ||:....|  
plant   197 EDG-----------AFSGIAFITFDTEDGAKRALAFDRAAMGDRYLTIQQYVKTTTPSIPRRK-- 248

  Fly   247 QAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKG-CKGVAYVCFQKP 310
            .:....|...|....:::|:|.:..||..:|::||.| .|:.:|..::.:.| .||.|:|.|:..
plant   249 TSSGFAPEMVDGYNRVYIGNLAWDTTERDIRKLFSDC-VINSVRLGKNKETGEFKGYAHVDFKDS 312

  Fly   311 DAVGLALELNQTLLDDRPINV-----ER-------YQVKKLGAKQVRDAAAAS------------ 351
            .:|.:||:|:|.::..||:.:     :|       .:....|:..:.|..||:            
plant   313 VSVAIALKLDQQVICGRPVKICCALKDRPATDHTPGETNNAGSYNMEDTYAAADPVPALAGRSEV 377

  Fly   352 ------AASKTSSKTK--------AKNQNSAGAKKRLDKKKGKENGSLKKE---GAPTGQ 394
                  |.:.:|||.|        .|...|.....:|.|...:.|..|.:|   |.|..|
plant   378 DDGNYFATTVSSSKVKRRVCYECGEKGHLSTACPIKLQKADDQANSKLGQETVDGRPAMQ 437

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12288NP_609822.1 RRM1_RBM34 156..237 CDD:409828 15/89 (17%)
RRM_SF 261..332 CDD:473069 23/76 (30%)
PHIP1NP_191094.1 RRM1_PHIP1 163..234 CDD:409714 15/81 (19%)
RRM2_PHIP1 263..334 CDD:409715 23/71 (32%)
PTZ00368 393..592 CDD:173561 10/44 (23%)

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