Protein Alignment CG12288 and PAB7

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_181204.1
• Gene: PAB7 / 818238
• AraportID: AT2G36660
• Length: 609
• Species: Arabidopsis thaliana
• Alignment Length: 337
• Identity: 78/337 - (23%)
• Similarity: 138/337 - (40%)
• Gaps: 62/337 - (18%)

  Fly    44 VPKDEVKAAVQESPKK----LSAKDLAKIEKKKAKKQAQKLKKQQNKLAPKEIKTEPEAQVKVES 104
            :|:....|.:|:..||    :|.| :|.:|..|::... .::.:|...|...|:|.....|
plant   119 LPESVTNAVLQDMFKKFGNIVSCK-VATLEDGKSRGYG-FVQFEQEDAAHAAIQTLNSTIV---- 177

  Fly   105 KATKKEKVEKEPTTAPNEKPKGKVSKKAKANANNKDEEGVKRIRNPAEEASTVFVGNLPINTKRV 169
                          |..|...||..||            ..|:: |.|:.:.:::.||..:....
plant   178 --------------ADKEIYVGKFMKK------------TDRVK-PEEKYTNLYMKNLDADVSED 215

  Fly   170 QLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAGSLNAYVVLEKPEIAQQAL-ALNGSEFKENH 233
            .|.:.|..:|.:.|:.:.        |.:.|...|  .|:|..:.||.|::|. .:||::|....
plant   216 LLREKFAEFGKIVSLAIA--------KDENRLCRG--YAFVNFDNPEDARRAAETVNGTKFGSKC 270

  Fly   234 LRVTPAS--------MAEKFGQAKDKQPSDKDAKR--TIFVGSLKYSATEEQLREIFSSCGEIDY 288
            |.|..|.        :.|:|   |:|....|...:  .|:|.::..:.|||:||:.||.||.|..
plant   271 LYVGRAQKKAEREQLLREQF---KEKHEEQKMIAKVSNIYVKNVNVAVTEEELRKHFSQCGTITS 332

  Fly   289 IRCLQDGDKGCKGVAYVCFQKP-DAVGLALELNQTLLDDRPINVERYQVKKLGAKQVRDAAAASA 352
            .:.:.|.....||..:|||..| :|:......:..:...:|:.|...|.|:....|::.......
plant   333 TKLMCDEKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQKKEDRKMQLQVQFGNRV 397

  Fly   353 ASKTSSKTKAKN 364
            .::.||.:.:.|
plant   398 EARKSSSSASVN 409

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	19/82 (23%)
		RRM_SF	261..332	CDD:302621	21/71 (30%)
PAB7	NP_181204.1	PABP-1234	24..582	CDD:130689	78/337 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910