Protein Alignment CG12288 and pabpn1l

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: XP_021333291.1
• Gene: pabpn1l / 796580
• ZFINID: ZDB-GENE-080709-5
• Length: 166
• Species: Danio rerio
• Alignment Length: 91
• Identity: 31/91 - (34%)
• Similarity: 51/91 - (56%)
• Gaps: 2/91 - (2%)

  Fly   242 AEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKG-CKGVAYV 305
            ||.|.....::..|.| :|:|:||::.|.||.::|...|:|||.::.:....:...| .||.||:
Zfish    20 AELFFDMTHEERIDSD-RRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKGFAYI 83

  Fly   306 CFQKPDAVGLALELNQTLLDDRPINV 331
            .|...::|..|:.|::||...|.|.|
Zfish    84 EFSDRESVRTAMALDETLFRGRVIKV 109

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840
		RRM_SF	261..332	CDD:302621	25/72 (35%)
pabpn1l	XP_021333291.1	RRM_SF	38..113	CDD:327398	25/72 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910