DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12288 and Rbm7

DIOPT Version :10

Sequence 1:NP_609822.1 Gene:CG12288 / 35027 FlyBaseID:FBgn0032620 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_659197.2 Gene:Rbm7 / 67010 MGIID:1914260 Length:265 Species:Mus musculus


Alignment Length:77 Identity:28/77 - (36%)
Similarity:43/77 - (55%) Gaps:1/77 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   257 DAKRTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALE-LN 320
            :|.||:|||:|:...|||.|.|:|...|.:..::..:|.|...|..|:|.|:...:|..|:. ||
Mouse     7 EADRTLFVGNLETKVTEELLFELFHQAGPVIKVKIPKDKDGKLKQFAFVNFKHEVSVPYAMNLLN 71

  Fly   321 QTLLDDRPINVE 332
            ...|..|||.::
Mouse    72 GIKLFGRPIKIQ 83

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12288NP_609822.1 RRM1_RBM34 156..237 CDD:409828
RRM_SF 261..332 CDD:473069 26/71 (37%)
Rbm7NP_659197.2 RRM_RBM7 9..83 CDD:410005 27/73 (37%)
PABP-1234 <12..>175 CDD:130689 25/72 (35%)
ZCCHC8 binding. /evidence=ECO:0000250|UniProtKB:Q9Y580 25..35 3/9 (33%)
ZCCHC8 binding. /evidence=ECO:0000250|UniProtKB:Q9Y580 59..76 4/16 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..125
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 166..224
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 237..265
Blue background indicates that the domain is not in the aligned region.

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