Protein Alignment CG12288 and CG34334

DIOPT Version :10

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_001097042.1
• Gene: CG34334 / 5740122
• FlyBaseID: FBgn0263829
• Length: 708
• Species: Drosophila melanogaster
• Alignment Length: 461
• Identity: 82/461 - (17%)
• Similarity: 159/461 - (34%)
• Gaps: 120/461 - (26%)

  Fly    16 PIKKEPGVVEDGKVTKKSKTKP-----------------KKKTVKVPKDEVKAAVQESPKKLSAK 63
            |:::...||.|.|..::|.|..                 :..|:.:.|....|............
  Fly   287 PMREPSSVVLDRKSRRRSSTSQNIASAASSSIGTNQAIIQSSTITITKTIANATGMAETNSSGGA 351

  Fly    64 DLAKIEKKKAKKQAQKLK--------KQQNKLAPKEIKTEPEAQVKVESKA-------------- 106
            .::..:.|......|..|        .:....|||.......::..|.|.|
  Fly   352 SISSTKNKGDSSTGQSSKTVVTNNAGSKAGYQAPKTSVASTSSKAVVRSNASASSGHGNHTSSSS 416

  Fly   107 -------TKKEKVEKEPTTAPNEKPKGKVSKKAKANANNKDEEGVKRIRNPAEEASTVFVGNLPI 164
                   :.:....|:...:|.:...|....|.|::          :|.:|....|:...|..|.
  Fly   417 SFTQLHSSARPSTAKDHDKSPQQNRSGSSGPKGKSS----------KINDPPRRGSSPSAGAEPT 471

  Fly   165 NTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAG-----SLNAY-VVLEKPEIAQQALA 223
            ..|:           .||:...|....:  :.|::.:..|     |...| .|.|..::|.:
  Fly   472 RQKQ-----------SVQNQNGRNCSSQ--WNHRRGEGDGEGAEASGRGYRAVGEVNKVAYR--- 520

  Fly   224 LNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFSSCGEIDY 288
             ||.:             |.||     :||. ::.:  :.:..|....|:|.:.|||...|.:..
  Fly   521 -NGKD-------------AFKF-----RQPV-RNVR--LHIKGLTRQVTKEHITEIFGHFGALTA 563

  Fly   289 IRCLQD---GDKGCKGVAYVCFQKPDAVGLALE-LNQTLLDDRPINVERYQVKKLGA--KQVRDA 347
            :....|   |.:| :|.|:|.:.:|:....|:: :|...:|.:.|.|..:|...|.|  :|.|..
  Fly   564 VDFPMDRFQGRQG-RGYAFVEYSRPEDCASAIKHMNGGQIDGKLIRVSAFQESMLKAPWRQYRRY 627

  Fly   348 AAASAASKTSSKTKAKNQNSAGAKKRLDKKKGKENGSLKKEGAPTGQKKKSEYRGVKVDGIKKAK 412
            :..:  .:.|.:|.:::.:|:.::.......|.|.||           :.|..|...:.|.:.::
  Fly   628 SPVN--RRQSQRTLSRSGSSSRSRSPSRSASGSEYGS-----------RSSHSRVRSMSGSRYSR 679

  Fly   413 KPKKKS 418
            :.:.:|
  Fly   680 RNRSQS 685

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	15/86 (17%)
		RRM_SF	261..332	CDD:473069	18/74 (24%)
CG34334	NP_001097042.1	Herpes_BLLF1	<312..504	CDD:282904	28/214 (13%)
		RRM_RNPS1	537..610	CDD:409800	18/73 (25%)