Protein Alignment CG12288 and SF2

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_001247139.1
• Gene: SF2 / 53443
• FlyBaseID: FBgn0283477
• Length: 255
• Species: Drosophila melanogaster
• Alignment Length: 259
• Identity: 58/259 - (22%)
• Similarity: 97/259 - (37%)
• Gaps: 53/259 - (20%)

  Fly   157 VFVGNLP--INTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAGSLNAYVVLEKPEIAQ 219
            ::|||||  |.||.:|  .||..:|.|..:.|:...|...             |:|..|....|.
  Fly     9 IYVGNLPPDIRTKDIQ--DLFHKFGKVTFVDLKNRRGPPF-------------AFVEFEDARDAD 58

  Fly   220 QAL-ALNGSEFKENHLRVT------PASMAEKFGQAKDKQ-----------PSDKDAKRTIFVGS 266
            .|: |.:|.::....|||.      |.|.  :.|...|:.           |..|.::..:.|..
  Fly    59 DAVKARDGYDYDGYRLRVEFPRGGGPGSY--RGGNRNDRSRDGGGRMGGRGPPAKRSQYRVMVTG 121

  Fly   267 LKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALELNQTLLDDRPINV 331
            |..|.:.:.|::.....|::    |..|..|...||  |.|.:.:.:..|::    .|||.....
  Fly   122 LPASGSWQDLKDHMREAGDV----CFADTYKDGSGV--VEFLRHEDMKYAIK----KLDDSRFRS 176

  Fly   332 ERYQVKKLGAKQVRDAAAASAASKTSSKTKAKNQNSAGAKKR--LDKKKGKENGSL-KKEGAPT 392
            ...:|..:   :||:.:..:........:......|.|...|  .|:.:.:...|. ::.|.||
  Fly   177 HEGEVAYI---RVREDSGDNDRGGGGGGSGGGGGGSGGGGSRDYRDRSRSRSFSSRPRRRGTPT 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	24/82 (29%)
		RRM_SF	261..332	CDD:302621	16/70 (23%)
SF2	NP_001247139.1	RRM_SF	3..80	CDD:418427	25/85 (29%)
		RRM2_SRSF1_like	115..188	CDD:410013	18/85 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910