Protein Alignment CG12288 and Rbm34

DIOPT Version :10

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_766350.2
• Gene: Rbm34 / 52202
• MGIID: 1098653
• Length: 442
• Species: Mus musculus
• Alignment Length: 409
• Identity: 117/409 - (28%)
• Similarity: 189/409 - (46%)
• Gaps: 84/409 - (20%)

  Fly    38 KKKTVKVPKDEVKAAVQESPKKLSAKDLAKIEKKKAKKQAQKLKKQQNKLAPKEIKTEPEAQVKV 102
            ||:.:....|:.:.:|.::.|.:..:...|::.||.....::|..:::.||..:::.|.. |.:.
Mouse    78 KKRKLDDDDDDEEESVSQTKKPVLQEPSRKVKVKKLSDADKRLANRESALASADLEEELH-QDQG 141

  Fly   103 ESKATKKEKVEKEPTTAPNEKPKGKVSK-KAKANANNKDEEGVKRIR---NPAEE----ASTVFV 159
            :.:..:.:.             :|||:. :|...|.:..::|.:|.:   ||.||    ..||||
Mouse   142 QGRRRRSQS-------------RGKVADGEALDVALSLAKDGGQRTKIPVNPEEERLKNERTVFV 193

  Fly   160 GNLPINTKRVQLVKLFQPYGLVQSIRLRT------------AGGKQLFKHKQRKVAGSLNAYVVL 212
            ||||:...:.:|...|:.||.|:|:|.|:            |..|:.| |..:|   |:|||||.
Mouse   194 GNLPVTCNKKKLKSFFKEYGQVESVRFRSVMPAEGTLTKKLAAIKRKF-HPDQK---SINAYVVF 254

  Fly   213 EKPEIAQQALALNGSEFKEN-HLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQL 276
            :....|.:||..||::..|. .:||..||           :.:.:| ||::|||:|.|...:..|
Mouse   255 KDESAAAKALQRNGAQIAEGFRIRVDLAS-----------ETASRD-KRSVFVGNLPYKIEDSAL 307

  Fly   277 REIFSSCGEIDYIRCLQDGDKGC-KGVAYVCFQKPDAVGLALELNQTLLDDRPINVERYQVKKLG 340
            .|.|..||.|..:|.:::...|. :|..||.|:..|||.|||:||.:.|..|.:.|.|
Mouse   308 EEHFLDCGSIVAVRIVRNPLTGVGRGFGYVLFENTDAVHLALKLNNSELMGRKLRVMR------- 365

  Fly   341 AKQVRDAAAASAASKTSSKTKAKNQNS-AGAKKRLDKKKGKENGSLK------KEGAPTGQKKKS 398
                           :.:|.|.|.||| ...||.:.|.|.:.|.:.|      |||.   ...|:
Mouse   366 ---------------SVNKEKLKQQNSNPSLKKDVIKPKQRLNFTSKEGKFHSKEGK---FHSKN 412

  Fly   399 EYRGVKVDGIKKAKKPKKK 417
            .:.|.|...:||.||.:||
Mouse   413 AFIGEKAVLMKKKKKGQKK 431

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	34/93 (37%)
		RRM_SF	261..332	CDD:473069	27/71 (38%)
Rbm34	NP_766350.2	RRM1_RBM34	189..280	CDD:409828	34/94 (36%)
		RRM2_RBM34	292..364	CDD:409829	27/71 (38%)