Protein Alignment CG12288 and Hrb87F

DIOPT Version :10

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_476806.2
• Gene: Hrb87F / 48535
• FlyBaseID: FBgn0004237
• Length: 385
• Species: Drosophila melanogaster
• Alignment Length: 230
• Identity: 55/230 - (23%)
• Similarity: 93/230 - (40%)
• Gaps: 49/230 - (21%)

  Fly   132 AKANANNKDEEGVKRIRNPAEEASTVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFK 196
            |:.|.:|.:.:..:.|..| |:...:|:|.|...|....|...|:.:|.:..:
  Fly     2 AEQNDSNGNYDDGEEITEP-EQLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDV------------ 53

  Fly   197 HKQRKVAGSLNAYVVLEKPEIAQ----------QALALNGSEFKENHLRVTPASMAEKFGQAKDK 251
                         ||::.|:..:          |:..::.::....| ::...::..|  :|..:
  Fly    54 -------------VVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPH-KIDGRTVEPK--RAVPR 102

  Fly   252 QPSDK-DAKRTI---FVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCK-GVAYVCFQKPD 311
            |..|. :|..|:   |||.|:....||.|||.|...|:|..:..:.|.|.|.| |.|::.|...|
  Fly   103 QEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYD 167

  Fly   312 AVGLALELNQTLLDDRPINVERYQVKKLGAKQVRD 346
            .|...: |.:|    ..|..:...|||..|||..|
  Fly   168 PVDKII-LQKT----HSIKNKTLDVKKAIAKQDMD 197

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	12/90 (13%)
		RRM_SF	261..332	CDD:473069	25/74 (34%)
Hrb87F	NP_476806.2	RRM1_hnRNPA_like	25..102	CDD:409992	14/104 (13%)
		RRM_SF	116..188	CDD:473069	24/76 (32%)