DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12288 and AgaP_AGAP003171

DIOPT Version :9

Sequence 1:NP_609822.1 Gene:CG12288 / 35027 FlyBaseID:FBgn0032620 Length:435 Species:Drosophila melanogaster
Sequence 2:XP_001237501.2 Gene:AgaP_AGAP003171 / 4576840 VectorBaseID:AGAP003171 Length:363 Species:Anopheles gambiae


Alignment Length:404 Identity:137/404 - (33%)
Similarity:194/404 - (48%) Gaps:58/404 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KVTKKSKTKPKKKTVKVPKDEVKAAVQESPKKLSAKDLAKIEKKKAKKQAQKLKKQQNKLAPKEI 92
            |:|.:.|....||..|:.|:.::....|. :||          ||.||...:.:.::.:|||   
Mosquito     2 KLTAEKKPLKAKKVAKLNKNTIEEQTHEK-RKL----------KKEKKAKLETESKEEELAP--- 52

  Fly    93 KTEPEAQVKVESKATKKEK-VEKEPTTAPNEKPKGKVSKKAKANANNKDEEGVKRIRNPAEEAST 156
              |.|....:|::|.::|: ||.:.....|  .:||...|||.....:.::..|  :.|..:..|
Mosquito    53 --EQEMDAAMENEANEEEEDVENDEAVVAN--GEGKAKSKAKTPKVKEVKQEAK--QKPRGKEYT 111

  Fly   157 VFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAGSLNAYVVLEKPEIAQQA 221
            :||||||...|:..|..:|..||.:|:|||||..|.::|..|......|||||||....|..:||
Mosquito   112 IFVGNLPKTIKQKDLRVMFSKYGTIQTIRLRTNTGLKMFNKKVLSKVPSLNAYVVYNSKEEMEQA 176

  Fly   222 LALNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFSSCGEI 286
            ..|:|.....|.:||.||          ||:... |||.|:|||::....|:..|.|.||..|.|
Mosquito   177 CQLDGEMVSNNRIRVCPA----------DKKQIG-DAKATVFVGNIARGTTDNDLHEFFSRVGPI 230

  Fly   287 DYIRCLQDGDKGCKGVAYVCFQKPDAVGLALELNQTLLDDRPINVER-------YQVKKLGAKQV 344
            :|:|  |.||   |.||||||:|..::..||:|||..|:.|.|.||:       .:|.|.|....
Mosquito   231 EYVR--QIGD---KYVAYVCFKKGVSIMKALKLNQESLNGRLIRVEKVDTTRTNVKVNKKGHVVP 290

  Fly   345 RDAAAASAASKTSSKTKAKNQ-NS----AGAK---KRLDKKKGKENGSLKKEGAPTGQKKKSEYR 401
            |:...||..:.|::....:.: ||    ||||   |....|..|.|.||||......|||     
Mosquito   291 RNRLPASPGTNTAAAPAGEGKANSTGGGAGAKFHGKVAHAKGKKSNVSLKKGKGSVAQKK----- 350

  Fly   402 GVKVDGIKKAKKPK 415
             :....:|.|.|.|
Mosquito   351 -MLASKLKAAMKQK 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12288NP_609822.1 RRM1_RBM34 155..237 CDD:240840 35/81 (43%)
RRM_SF 261..332 CDD:302621 32/70 (46%)
AgaP_AGAP003171XP_001237501.2 RRM <100..230 CDD:223796 55/142 (39%)
RRM_SF 111..191 CDD:302621 34/79 (43%)
RRM_SF 205..271 CDD:302621 32/70 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 63 1.000 Domainoid score I17298
eggNOG 1 0.900 - - E33208_3BIWG
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 158 1.000 Inparanoid score I6692
OMA 1 1.010 - - QHG55893
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004008
OrthoInspector 1 1.000 - - otm50691
Panther 1 1.100 - - LDO PTHR23236
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.930

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