Protein Alignment CG12288 and hnrnpc

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: XP_012815605.1
• Gene: hnrnpc / 448664
• XenbaseID: XB-GENE-489141
• Length: 343
• Species: Xenopus tropicalis
• Alignment Length: 326
• Identity: 63/326 - (19%)
• Similarity: 115/326 - (35%)
• Gaps: 104/326 - (31%)

  Fly   117 TTAPNEKPKGKVSKKAKANANNKDEEGVKRIRNPAEEASTVFVGNLPINT---KRVQLVKLFQPY 178
            |||....|.   |....:|..||.:        |....|.||:|||  ||   |:..:..:|..|
 Frog    50 TTAKIASPG---SDMMASNVTNKTD--------PRSMNSRVFIGNL--NTLVVKKADVEAIFSKY 101

  Fly   179 GLVQSIRLRTAGGKQLFKHKQRK-----VAGSLNAYVVLEKPEIAQQALALN-GSEFKENHLRV- 236
            |.:....:..  |....::...:     |||.       :...||.|.:.:| .:|.|.|..:.
 Frog   102 GKIVGCSVHK--GYAFVQYSNERNARTAVAGE-------DGRMIAGQVMDINLAAEPKANRSKTG 157

  Fly   237 TPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKG 301
            ...|.|:.:|.:.|   .:.|.:|..:.   .||||.
 Frog   158 VKRSAADMYGSSFD---LEYDFQRDYYD---SYSATR---------------------------- 188

  Fly   302 VAYVCFQKPDAVGLALELNQTLLDDRPINVERYQVKKLGAKQVRDAAAASAASKTSSKTKAKNQN 366
                 ...|..:..|:                     :.:|:.|.:..||...|:...:|:..:.
 Frog   189 -----VPPPPPIARAV---------------------VPSKRQRVSGNASRRGKSGFNSKSGQRG 227

  Fly   367 SAGAKKRLDKKKGKENGSLKKEGAPTGQKKKSEYRGVKVDGIKKAKKPKKKS----NDQQTALAK 427
            .:....||   ||.:..::|||.:...|:..|     .::.:::.::.:.|.    :::|::|:.
 Frog   228 GSSKSSRL---KGDDLQAIKKELSQIKQRVDS-----LLENLERIEREQSKQDIKLDEEQSSLST 284

  Fly   428 K 428
            |
 Frog   285 K 285

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	23/91 (25%)
		RRM_SF	261..332	CDD:302621	6/70 (9%)
hnrnpc	XP_012815605.1	RRM_hnRNPC	76..146	CDD:241047	20/80 (25%)
		APG6_N	<229..322	CDD:375248	13/65 (20%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910