Protein Alignment CG12288 and elavl1

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_001005461.1
• Gene: elavl1 / 448062
• XenbaseID: XB-GENE-481800
• Length: 326
• Species: Xenopus tropicalis
• Alignment Length: 245
• Identity: 57/245 - (23%)
• Similarity: 95/245 - (38%)
• Gaps: 63/245 - (25%)

  Fly   155 STVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAG-SLN-AYVVLEKPEI 217
            :.:.|..||.|..:.:|..||...|.|:|.:|           .:.|||| ||. .:|.....:.
 Frog    20 TNLIVNYLPQNMTQDELRSLFSSIGEVESAKL-----------IRDKVAGHSLGYGFVNYLNAKD 73

  Fly   218 AQQAL-ALNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFS 281
            |::|: .|||...:...::|:         .|:....|.|||  .:::..|..:.|::.:.::|.
 Frog    74 AERAINTLNGLRLQSKTIKVS---------VARPSSESIKDA--NLYISGLPRTMTQKDVEDMFL 127

  Fly   282 SCGEIDYIRCLQDGDKG-CKGVAYVCFQK---------------------PDAVGLALELNQ--- 321
            ..|.|...|.|.|...| .:|||::.|.|                     |..|..|...||
 Frog   128 PFGRIINSRVLVDQATGLSRGVAFIRFDKRSEAEEAIASFNGHKPPGSSEPITVKFAANPNQNKN 192

  Fly   322 -TLLDD----------RPIN--VERYQVKKLGAKQVRDAAAASAASKTSS 358
             .||..          .|::  .:|::...:|...:...:..:.||..||
 Frog   193 MALLSQLCHSPARRFGGPVHHQAQRFRFSPMGVDHMSSISGVNVASSASS 242

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	23/84 (27%)
		RRM_SF	261..332	CDD:302621	22/108 (20%)
elavl1	NP_001005461.1	RRM	19..326	CDD:330708	57/245 (23%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG55893
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920