Protein Alignment CG12288 and rbm34

DIOPT Version :10

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_001002382.1
• Gene: rbm34 / 436655
• ZFINID: ZDB-GENE-040718-77
• Length: 411
• Species: Danio rerio
• Alignment Length: 423
• Identity: 131/423 - (30%)
• Similarity: 192/423 - (45%)
• Gaps: 95/423 - (22%)

  Fly    14 LKPIKKEPGV---VEDGKVTKKSKTKPKKKTVKVPKDEVKAAVQESPKKLSAKDLAKIEKKKAKK 75
            |.|.|.||.|   |.|..|.|.             ||:|:.. ::.||.|||.:    :|.:.::
Zfish    52 LPPPKIEPKVTPAVSDNAVVKS-------------KDQVQKQ-KKKPKTLSAAE----KKLQDRE 98

  Fly    76 QAQKLKKQQNKLAPKEIKTEPEAQVKVESKATKKEKVEKEPTTAPNEKPKGKVSKKAKANANNKD 140
            .|.:...::.:.:.|::|         ..:|...|..|:.||         |..|..|.||
Zfish    99 SALQNADEEGQASAKKVK---------RKRADGGEDEEERPT---------KHKKTVKFNA---- 141

  Fly   141 EEGVKRIRNPAEEASTVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAG- 204
            ||.:|..|       ||||||||.:.|:..|:.:|:..|:::|:|.|:...:.  ....||||.
Zfish   142 EERLKMKR-------TVFVGNLPSSCKKKDLLSVFKKSGVIESVRFRSVIRED--PTMSRKVAAI 197

  Fly   205 ---------SLNAYVVLEKPEIAQQALALNGSEFKEN-HLRVTPASMAEKFGQAKDKQPSDKDAK 259
                     ::|||:|.::.|.|..||..||.|.:.. ::||...|           |.|..|.|
Zfish   198 QRKVHPKKQNINAYIVFKEEESATDALKWNGHEIQAGFYIRVDRVS-----------QHSKHDHK 251

  Fly   260 RTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGC-KGVAYVCFQKPDAVGLALELNQTL 323
            |:||||:|.|..:|..|:..|..||.|:.:|.::|.|.|. ||..||.|:.||:|.|||:||.:.
Zfish   252 RSIFVGNLPYDISELPLQNHFQECGNIEAVRLVRDRDSGMGKGFGYVLFESPDSVMLALKLNGST 316

  Fly   324 LDDRPINVERYQVKKLGAKQVRDAAAASAASKTSSKTKAKNQNSAGA----KKRLDKKKGKENGS 384
            |..|.|.|:| .|||...|            ||....||:.|.:.|.    |:......|::|.:
Zfish   317 LQQRKIRVKR-SVKKEKEK------------KTPPGRKAEGQRTGGGLKGPKQEFRNNTGRKNFT 368

  Fly   385 LKKEGAPTGQKKKSEYRGVKVDGIKKAKKPKKK 417
            ......||   :.|.::|...|...|..||:||
Zfish   369 KNPRNKPT---QASSFKGEMADPTAKRGKPQKK 398

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	31/91 (34%)
		RRM_SF	261..332	CDD:473069	32/71 (45%)
rbm34	NP_001002382.1	RRM1_RBM34	149..240	CDD:409828	32/99 (32%)
		RRM2_RBM34	253..325	CDD:409829	32/71 (45%)