Protein Alignment CG12288 and Hrb98DE

DIOPT Version :10

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_524543.1
• Gene: Hrb98DE / 43385
• FlyBaseID: FBgn0001215
• Length: 365
• Species: Drosophila melanogaster
• Alignment Length: 270
• Identity: 51/270 - (18%)
• Similarity: 87/270 - (32%)
• Gaps: 54/270 - (20%)

  Fly   129 SKKAKANANNKDEEGVKRIRNPAEEASTVFVGNLPINTKRVQLVKLFQPYGLVQSI------RLR 187
            ::....|:|..|::..:......|....:|:|.|...|....|...|:.:|.:..:      |.:
  Fly     5 NQNQNGNSNGHDDDFPQDSITEPEHMRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTK 69

  Fly   188 TAGG--------KQLFKHKQRKVAGSLNAYVVLEKPEIAQQALALNGSEFKENHLRVTPASMAEK 244
            .:.|        ..:....|:.....::..||..|..:.:|.:
  Fly    70 RSRGFGFITYSHSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDI---------------------- 112

  Fly   245 FGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCK-GVAYVCFQ 308
                  ..|:.....:.:|||:||....|:.:|:.|...|.|..|..:.|.:.|.| |.|:|.|.
  Fly   113 ------DSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFD 171

  Fly   309 KPDAVGLALELNQTLLDDRPINVERYQVKKLGAKQVRDAAAASAASKTSSKTKAKNQNSAGAKKR 373
            ..|.|...:     |.....:|.:...|||...||...............:......|..|.
  Fly   172 DYDPVDKVV-----LQKQHQLNGKMVDVKKALPKQNDQQGGGGGRGGPGGRAGGNRGNMGGG--- 228

  Fly   374 LDKKKGKENG 383
               ..|.:||
  Fly   229 ---NYGNQNG 235

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	14/94 (15%)
		RRM_SF	261..332	CDD:473069	22/71 (31%)
Hrb98DE	NP_524543.1	RRM1_hnRNPA_like	32..109	CDD:409992	13/76 (17%)
		RRM_SF	123..195	CDD:473069	22/76 (29%)