Protein Alignment CG12288 and Elavl4

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: XP_006238653.1
• Gene: Elavl4 / 432358
• RGDID: 1560027
• Length: 393
• Species: Rattus norvegicus
• Alignment Length: 222
• Identity: 51/222 - (22%)
• Similarity: 95/222 - (42%)
• Gaps: 37/222 - (16%)

  Fly    93 KTEPEAQVKVESKATKKEKVEKEPTTAPNEKPKGKVSKKAKANANNKDEEGVKRIRNPAEEAST- 156
            :|...|.:..|..:|.:.:|...||:..:..|          ::||::.....:.....:::.|
  Rat     6 RTLNAALLNNEIISTMEPQVSNGPTSNTSNGP----------SSNNRNCPSPMQTGAATDDSKTN 60

  Fly   157 VFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAGSLNAY--VVLEKPEIAQ 219
            :.|..||.|..:.:...||...|.::|.:|           .:.|:.|....|  |....|:.|:
  Rat    61 LIVNYLPQNMTQEEFRSLFGSIGEIESCKL-----------VRDKITGQSLGYGFVNYIDPKDAE 114

  Fly   220 QAL-ALNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFSSC 283
            :|: .|||...:...::|:         .|:....|.:||  .::|..|..:.|:::|.::||..
  Rat   115 KAINTLNGLRLQTKTIKVS---------YARPSSASIRDA--NLYVSGLPKTMTQKELEQLFSQY 168

  Fly   284 GEIDYIRCLQDGDKG-CKGVAYVCFQK 309
            |.|...|.|.|...| .:||.::.|.|
  Rat   169 GRIITSRILVDQVTGVSRGVGFIRFDK 195

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	20/85 (24%)
		RRM_SF	261..332	CDD:302621	16/50 (32%)
Elavl4	XP_006238653.1	ELAV_HUD_SF	56..392	CDD:273741	41/162 (25%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG55893
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920