DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG12288 and rbm39a

DIOPT Version :9

Sequence 1:	NP_609822.1	Gene:	CG12288 / 35027	FlyBaseID:	FBgn0032620	Length:	435	Species:	Drosophila melanogaster
Sequence 2:	NP_001012304.1	Gene:	rbm39a / 406251	ZFINID:	ZDB-GENE-040426-2852	Length:	523	Species:	Danio rerio

Alignment Length:	341	Identity:	85/341 - (24%)
Similarity:	141/341 - (41%)	Gaps:	58/341 - (17%)

- Green bases have known domain annotations that are detailed below.

  Fly    46 KDEVKAA-----VQESPKKLSAKDLAKIEKKKAKKQAQKLKKQQNKLAPKEIKTEPEAQVKVESK 105
            ||:.|:.     .:.|.||..:|..::...:|..|..::.|....:.:....:....::.:..|:
Zfish    17 KDDNKSLSTNGHEERSKKKKRSKSRSRSRDRKRSKSRERKKSHDRRRSRSRDRKRSRSKERRRSR 81

  Fly   106 ATKKEKVEKEPTTAP------NEKPKG--------KVSKKAKANAN--NKDEEGVKR-IRN--PA 151
            :..:|:..:  ..||      |..|:|        |:|::...:.:  .||...|:: |.|  |.
Zfish    82 SRSRERGGR--YRAPFSGLKFNGGPRGKTGPPPAIKLSRRRSRSRSPFKKDRSPVRQPIDNLTPE 144

  Fly   152 E-EASTVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAGSLNAYVVLEKP 215
            | :|.|||...|....:...|.:.|...|.|:.:|:       :.....|:..|.  ||:.....
Zfish   145 ERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRI-------ISDRNSRRSKGI--AYIEFVDS 200

  Fly   216 EIAQQALALNGSEFKENHLRVTPASMAEK---FGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLR 277
            .....|:.|:|.......: :..||.|||   ...|.:.|.......| ::||||.::.||:.||
Zfish   201 TSVPLAIGLSGQRLLGVPI-IVQASQAEKNRAAALANNLQKGSAGPMR-LYVGSLHFNITEDMLR 263

  Fly   278 EIFSSCGEIDYIRCLQDGDKG-CKGVAYVCFQKPDAVGLALE-LNQTLLDDRPINV----ERYQV 336
            .||...|.||.|:.:.|.:.| .||..::.|...:....||| ||...|..||:.|    ||
Zfish   264 GIFEPFGRIDSIQLMMDSETGRSKGYGFITFSDAECAKKALEQLNGFELAGRPMKVGHVTER--- 325

  Fly   337 KKLGAKQVRDAAAASA 352
                    .||:.||:
Zfish   326 --------TDASTASS 333

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	16/81 (20%)
CG12288	NP_609822.1	RRM_SF	261..332	CDD:302621	28/76 (37%)
rbm39a	NP_001012304.1	SF-CC1	91..511	CDD:273721	73/265 (28%)
		RRM1_RBM39	148..232	CDD:240980	22/93 (24%)
		RRM2_RBM23_RBM39	248..320	CDD:240730	27/71 (38%)
		RBM39linker	337..432	CDD:292157
		RRM3_RBM39_like	416..500	CDD:240731
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910