DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12288 and dazl

DIOPT Version :10

Sequence 1:NP_609822.1 Gene:CG12288 / 35027 FlyBaseID:FBgn0032620 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_989079.1 Gene:dazl / 394676 XenbaseID:XB-GENE-1006218 Length:286 Species:Xenopus tropicalis


Alignment Length:77 Identity:19/77 - (24%)
Similarity:33/77 - (42%) Gaps:3/77 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   234 LRVTPASMAEKFGQAKDKQ---PSDKDAKRTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDG 295
            :..|.||..|:...|..:.   |..|....|:|||.:..:..|..:..:|...|::..::.:.|.
 Frog     1 MSATEASAGEEAASATSQAFVLPEGKVIPNTVFVGGIDITMDEMAIGNLFEKYGKVKDLKIITDR 65

  Fly   296 DKGCKGVAYVCF 307
            ....||..:|.|
 Frog    66 TGVSKGYGFVSF 77

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12288NP_609822.1 RRM1_RBM34 156..237 CDD:409828 0/2 (0%)
RRM_SF 261..332 CDD:473069 12/47 (26%)
dazlNP_989079.1 RRM_DAZL 25..106 CDD:410073 13/53 (25%)
PABP-1234 <30..198 CDD:130689 12/48 (25%)

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