Protein Alignment CG12288 and CG11726

DIOPT Version :10

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_648461.1
• Gene: CG11726 / 39275
• FlyBaseID: FBgn0036156
• Length: 291
• Species: Drosophila melanogaster
• Alignment Length: 219
• Identity: 46/219 - (21%)
• Similarity: 78/219 - (35%)
• Gaps: 54/219 - (24%)

  Fly    98 AQVKVESKATKKEKVEKEPTTAPNEKPKGK-------VSKKAKANANNKD----EEGVKRIR--- 148
            |::...|::.|...|.....::.:....|:       |:|...:..:|.:    .:|.|:..
  Fly     2 AKMSKSSRSFKLPPVSSSSVSSVSGSESGQGLEDMLHVTKVRTSQVDNAELFMYGDGPKKSNSDL 66

  Fly   149 -------NPAEEAS-----TVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRK 201
                   :|.||.|     ...|.|||:.....:|.|:|..:    |||..|      ...|.::
  Fly    67 QKKVSTPDPEEEVSMEPPFVALVSNLPMECTEGELRKVFTSF----SIRSLT------IPKKGKR 121

  Fly   202 VAGSLNAYVVLEKPEIAQQALALNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKD--------- 257
            ..|.  |||.::..|...:.|       |.:.|:.....:..|.||...:.|:...
  Fly   122 PKGF--AYVEMDSREDLVRLL-------KMDKLKCRGRCLMAKIGQLPPEPPTKAAGDGFSLFTC 177

  Fly   258 AKRTIFVGSLKYSATEEQLREIFS 281
            :.|...:.|..|||:...|..|.|
  Fly   178 SGRQFDINSSHYSASVSDLSTIDS 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	20/80 (25%)
		RRM_SF	261..332	CDD:473069	7/21 (33%)
CG11726	NP_648461.1	RRM_SF	83..150	CDD:473069	20/85 (24%)