Protein Alignment CG12288 and CG3594

DIOPT Version :10

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_523855.1
• Gene: CG3594 / 37964
• FlyBaseID: FBgn0035063
• Length: 250
• Species: Drosophila melanogaster
• Alignment Length: 260
• Identity: 60/260 - (23%)
• Similarity: 100/260 - (38%)
• Gaps: 59/260 - (22%)

  Fly   145 KRIRNPAEEASTVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVA---GSL 206
            ||::....:.|...:||.....:|    ::|:              |..:.|...|..:   .|.
  Fly    18 KRVQRTVNDDSADLLGNFDDQKRR----EIFE--------------GTYVDKEDGRNPSDPEDSK 64

  Fly   207 NAYVVLEKPEIAQQALALNGSEFKENHLRVTPASMAEKFGQAKDKQPS------DKDAKRTIFVG 265
            :........|.|.:..|.:|:|.:|:         ||. ||....|.|      .|..:..::|.
  Fly    65 SEDEAKSDDEAAAEGSAASGAEEEES---------AEN-GQITSDQLSSLLRGASKTNRHVLYVT 119

  Fly   266 SLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALELNQTLLDDRPIN 330
            :|.:..|::.|...||:.|.:..||..:   |...|.|:|......:...|.:|:.|.|..|.|.
  Fly   120 NLNFETTKDDLELHFSAAGTVKSIRIPK---KRRGGFAFVEMADLSSFQNAFQLHNTELQGRNIK 181

  Fly   331 VERYQVKKLGAKQVRDAAAASAASKTSSKTKAKNQNSAGAKKRLDKKKGKENG-----SLKKEGA 390
            |           |:.:|....:|:|   |...|.:|...|:.|.::|...::|     .||||.|
  Fly   182 V-----------QISEAGKKKSANK---KNIIKQKNRKLAEMRNEQKTFTKSGKFYDKDLKKEKA 232

  Fly   391  390
              Fly   233  232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	14/83 (17%)
		RRM_SF	261..332	CDD:473069	19/70 (27%)
CG3594	NP_523855.1	SF-CC1	36..>197	CDD:273721	43/205 (21%)
		RRM	116..187	CDD:440488	21/84 (25%)