Protein Alignment CG12288 and CG3594

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_523855.1
• Gene: CG3594 / 37964
• FlyBaseID: FBgn0035063
• Length: 250
• Species: Drosophila melanogaster
• Alignment Length: 260
• Identity: 60/260 - (23%)
• Similarity: 100/260 - (38%)
• Gaps: 59/260 - (22%)

  Fly   145 KRIRNPAEEASTVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVA---GSL 206
            ||::....:.|...:||.....:|    ::|:              |..:.|...|..:   .|.
  Fly    18 KRVQRTVNDDSADLLGNFDDQKRR----EIFE--------------GTYVDKEDGRNPSDPEDSK 64

  Fly   207 NAYVVLEKPEIAQQALALNGSEFKENHLRVTPASMAEKFGQAKDKQPS------DKDAKRTIFVG 265
            :........|.|.:..|.:|:|.:|:         ||. ||....|.|      .|..:..::|.
  Fly    65 SEDEAKSDDEAAAEGSAASGAEEEES---------AEN-GQITSDQLSSLLRGASKTNRHVLYVT 119

  Fly   266 SLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALELNQTLLDDRPIN 330
            :|.:..|::.|...||:.|.:..||..:   |...|.|:|......:...|.:|:.|.|..|.|.
  Fly   120 NLNFETTKDDLELHFSAAGTVKSIRIPK---KRRGGFAFVEMADLSSFQNAFQLHNTELQGRNIK 181

  Fly   331 VERYQVKKLGAKQVRDAAAASAASKTSSKTKAKNQNSAGAKKRLDKKKGKENG-----SLKKEGA 390
            |           |:.:|....:|:|   |...|.:|...|:.|.::|...::|     .||||.|
  Fly   182 V-----------QISEAGKKKSANK---KNIIKQKNRKLAEMRNEQKTFTKSGKFYDKDLKKEKA 232

  Fly   391  390
              Fly   233  232

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	15/84 (18%)
		RRM_SF	261..332	CDD:302621	19/70 (27%)
CG3594	NP_523855.1	RRM3_Prp24	114..184	CDD:240744	20/83 (24%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	1	0.950	-	0	Normalized mean entropy	S2864
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR23236
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	3	2.960