Protein Alignment CG12288 and hnrnpa1b

DIOPT Version :10

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_956398.3
• Gene: hnrnpa1b / 378453
• ZFINID: ZDB-GENE-030912-14
• Length: 403
• Species: Danio rerio
• Alignment Length: 279
• Identity: 59/279 - (21%)
• Similarity: 93/279 - (33%)
• Gaps: 79/279 - (28%)

  Fly   148 RNPAEEASTVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAGSLNAYVVL 212
            |.| |:...:|:|.|...|....|...|:.:                         |:|...||:
Zfish     8 REP-EQLRKLFIGGLSFETTDDSLRAHFEQW-------------------------GTLTDCVVM 46

  Fly   213 EKPEIAQQALALNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKDAK------------------ 259
            :.|...:.    .|..|      ||.:|: ::...:.|.:|...|.:
Zfish    47 KDPNTKRS----RGFGF------VTYSSV-DEVNASMDARPHKVDGRLVEPKRAVSREDSSKPFA 100

  Fly   260 ----RTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKGCK-GVAYVCFQKPDAVGLALEL 319
                :.||||.:|....|..||:.|...|:|:.:..:.|...|.| |.|:|.|...|:|
Zfish   101 HTTVKKIFVGGIKDDTEENHLRDYFDQFGKIEVVEIMVDHKTGNKRGFAFVTFDDHDSV------ 159

  Fly   320 NQTLLDDRPINVERYQVKKLGAKQVRDAAAASAASKTSSKTKAKNQNSAGAKKRLDKKKGKENGS 384
                  || |.:::|........:||     .|.||.......:.....|...|.:..:...||.
Zfish   160 ------DR-IVIQKYHTVNGHNCEVR-----KALSKQEMANTGRGGGGGGGGDRGNFNRYGNNGG 212

  Fly   385 LKKE-GAPTGQKKKSEYRG 402
            ...: |...|...:..|.|
Zfish   213 YNNDFGGGGGGGNRDGYFG 231

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	13/80 (16%)
		RRM_SF	261..332	CDD:473069	23/71 (32%)
hnrnpa1b	NP_956398.3	None