Protein Alignment CG12288 and Syncrip

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_001382580.1
• Gene: Syncrip / 363113
• RGDID: 1305683
• Length: 623
• Species: Rattus norvegicus
• Alignment Length: 427
• Identity: 94/427 - (22%)
• Similarity: 157/427 - (36%)
• Gaps: 117/427 - (27%)

  Fly    46 KDEVKAAVQESPKKLSAKDLAKIEKKKA-----KKQAQKLKKQQNKLAPKEIKTEPEAQVKVESK 105
            :|...|.:|:    ....||:.::.|.|     .|..::.:||..|:|... |...||::|.
  Rat    70 EDGALAVLQQ----FKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSS-KGPDEAKIKA--- 126

  Fly   106 ATKKEKVEKEPTTAPNEKPKGKVSKKAKANANNKDEEGVKRIRNPAEEA----------STVFVG 160
            ..::.....:.||                        |.::...|..::          :.:|||
  Rat   127 LLERTGYTLDVTT------------------------GQRKYGGPPPDSVYSGQQPSVGTEIFVG 167

  Fly   161 NLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAGSLN---AYVVLEKPEIAQQAL 222
            .:|.:....:||.||:..|.:..:||           ....:.| ||   |:|.....|.||:|:
  Rat   168 KIPRDLFEDELVPLFEKAGPIWDLRL-----------MMDPLTG-LNRGYAFVTFCTKEAAQEAV 220

  Fly   223 AL-NGSEFKE-NHLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFSSC-- 283
            .| |..|.:. .|:.|..:.                 |...:||||:..|.|:||:.|.||..
  Rat   221 KLYNNHEIRSGKHIGVCISV-----------------ANNRLFVGSIPKSKTKEQILEEFSKVTE 268

  Fly   284 GEIDYIRCLQDGDKGCKGVAYVCFQKPDAVGLALELNQTLLDDR--------------PINVERY 334
            |..|.|...|..||  |.....||.:.:....|.:..:.|:..:              ||.....
  Rat   269 GLTDVILYHQPDDK--KKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDP 331

  Fly   335 QVKKLGAKQVRDAAAASAASKTSSKTKAKNQNSAGAKKRLDKKKGKENGSL---KKEGAPTGQKK 396
            :|    ..:|:.....:.|:..:.:...|:.:..|..:|:  ||.|:...:   :::||   .|.
  Rat   332 EV----MAKVKVLFVRNLANTVTEEILEKSFSQFGKLERV--KKLKDYAFIHFDERDGA---VKA 387

  Fly   397 KSEYRGVKVDG----IKKAKKP--KKKSNDQQTALAK 427
            ..|..|..::|    |..||.|  |:|....|...||
  Rat   388 MEEMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAK 424

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	24/86 (28%)
		RRM_SF	261..332	CDD:302621	24/86 (28%)
Syncrip	NP_001382580.1	None

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910