DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment CG12288 and Caper

DIOPT Version :9

Sequence 1:	NP_609822.1	Gene:	CG12288 / 35027	FlyBaseID:	FBgn0032620	Length:	435	Species:	Drosophila melanogaster
Sequence 2:	NP_609095.1	Gene:	Caper / 33989	FlyBaseID:	FBgn0031883	Length:	594	Species:	Drosophila melanogaster

Alignment Length:	271	Identity:	69/271 - (25%)
Similarity:	113/271 - (41%)	Gaps:	33/271 - (12%)

- Green bases have known domain annotations that are detailed below.

  Fly    67 KIEKKKAKKQAQKLKKQQNK-LAP-KEIKTEPEAQVKVESKATKKEKVEKEPTTAPNEKPKGKVS 129
            ::::.:.|::..:.:.||.| |:| :|.|         .|.:..:::         |.:.:|..|
  Fly   165 QVDRSRDKRRRSRSRDQQRKRLSPIRERK---------RSHSRSRDR---------NSRRRGTNS 211

  Fly   130 KKAKANANNKDEEGVKRIRNPAEEASTVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQL 194
            .:.::..|..|......:.....:|.|||...|....:...|.:.|...|.|:.:||.|....:.
  Fly   212 PRRRSPPNGADRTTPTELSPEERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKR 276

  Fly   195 FKHKQRKVAGSLNAYVVLEKPEIAQQALALNGSEFKENHLRV--TPASMAEKFGQAKDKQPSDKD 257
            ||.         .||:..:.||....||.|:|.......:.|  |.|........|...||....
  Fly   277 FKG---------IAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKSHT 332

  Fly   258 AKRTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKG-CKGVAYVCFQKPDAVGLALE-LN 320
            ....::||||.::.||:.||.||...|:||.|:.:.|.:.| .||..::.:...|....||| ||
  Fly   333 GPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALEQLN 397

  Fly   321 QTLLDDRPINV 331
            ...|..|.:.|
  Fly   398 GFELAGRLMKV 408

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	22/83 (27%)
CG12288	NP_609822.1	RRM_SF	261..332	CDD:302621	27/73 (37%)
Caper	NP_609095.1	RRM1_RBM39_like	238..310	CDD:240729	21/80 (26%)
		RRM2_RBM23_RBM39	337..409	CDD:240730	27/72 (38%)
		RBM39linker	425..500	CDD:292157
		RRM3_RBM39_like	483..567	CDD:240731
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.910