Protein Alignment CG12288 and eif4bb

DIOPT Version :10

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: XP_005166071.1
• Gene: eif4bb / 336619
• ZFINID: ZDB-GENE-030131-8563
• Length: 632
• Species: Danio rerio
• Alignment Length: 333
• Identity: 70/333 - (21%)
• Similarity: 127/333 - (38%)
• Gaps: 81/333 - (24%)

  Fly    25 EDGKVTKKSKTKPK--KKTVKVPKDEVKA---AVQESPKKLS-AKDLAKIEK-----KKAKKQAQ 78
            ::|:..:....:||  .|...:||:|.::   :.|.:|...| |..:....|     .|.::..:
Zfish   321 DEGREERGPPQRPKLNLKPRSIPKEEEQSGSVSPQSNPTNTSRASSIFGAAKPVDTAAKEREVEE 385

  Fly    79 KLKKQQNKLAPKEIKTEPEAQVKVESKATKKEKVEKEPTTAPNEKPK-----GKVSKKAKANANN 138
            :|||:|.:| .::::.:       :::.:::...:::|:....|.||     |..|...|.:...
Zfish   386 RLKKEQERL-QRQLEED-------KNRPSERRPRDRDPSWRSEEPPKERQHTGSESSHPKGSRCR 442

  Fly   139 KDEEGVKRI--------RNPAEEASTVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLF 195
            .||.....:        .:|...:.|...|:||:..       :..|.....:...|:.||..
Zfish   443 DDEHSENEVFSGQESEPISPTSPSPTSNQGSLPLKV-------MPAPPPKENAWAKRSLGGGA-- 498

  Fly   196 KHKQRKVAGSLNAYVVLEKPEIAQQALALNGSEFKENHL------RVTPA------------SMA 242
              .:::...|.||.:....|...:.|......: .||.:      :|.||            ...
Zfish   499 --NEKEAPPSANAPINKSAPRPNRSADERESGK-DENRVDGVRKDKVLPAGRGGGGGVGRGGGSV 560

  Fly   243 EKFGQA---------KDKQPSD-KDAKR----TIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQ 293
            |..|:.         |.::||| |:.||    .|.....||   ||.....|||..:  |...|.
Zfish   561 EGVGKGRGVDCPNKEKRREPSDRKEVKRDKDPRIASEPKKY---EESAPPKFSSASK--YAALLM 620

  Fly   294 DGDKGCKG 301
            |||:|.:|
Zfish   621 DGDQGEEG 628

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	15/86 (17%)
		RRM_SF	261..332	CDD:473069	15/41 (37%)
eif4bb	XP_005166071.1	RRM_eIF4B	94..175	CDD:409836
		PTZ00459	<429..532	CDD:185638	19/114 (17%)