Protein Alignment CG12288 and syncrip

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_999861.1
• Gene: syncrip / 326663
• ZFINID: ZDB-GENE-030131-4862
• Length: 630
• Species: Danio rerio
• Alignment Length: 410
• Identity: 89/410 - (21%)
• Similarity: 137/410 - (33%)
• Gaps: 127/410 - (30%)

  Fly    88 APKEIKTEPEAQVKVESKATKKEKVEKE--------PTTAPNEKPKGKVSKKAKANANNKDEEGV 144
            |.||...|...||.::.|.:....|:.:        .|....||...||.:..|    ..||..:
Zfish    64 ALKEFNEEGALQVLIQFKESDLSHVQNKSAFLCGVMKTYRQREKQGTKVVESTK----GPDEAKI 124

  Fly   145 KRIRN------------------PAEEAST---------VFVGNLPINTKRVQLVKLFQPYGLVQ 182
            |.:..                  |.|...|         :|||.:|.:....:||..|:..|.:.
Zfish   125 KILLERTGYTLDVTTGQRKYGGPPPESVYTGAQPTVGTEIFVGKIPRDLFEDELVPQFEKAGPIW 189

  Fly   183 SIRLRTAGGKQLFKHKQRKVAGSLN---AYVVLEKPEIAQQALAL-NGSEFKE-NHLRVTPASMA 242
            .:||            .......||   |::.....|.||:|:.| |..|.:. .|:.|..:.
Zfish   190 DLRL------------MMDPLSGLNRGYAFLTFCTKEAAQEAVKLCNNHEIRPGKHIGVCISV-- 240

  Fly   243 EKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFSSC--GEIDYIRCLQDGDKGCKGVAYV 305
                           |...:||||:..|.|:||:.|.||..  |..|.|...|..||  |.....
Zfish   241 ---------------ANNRLFVGSIPKSKTKEQIVEEFSKVTEGLTDVILYHQPDDK--KKNRGF 288

  Fly   306 CFQKPDAVGLALELNQTLLDDRP------INVE------------RYQVKKLGAKQVRDAAAASA 352
            ||.:.:....|.:..:.|:..:.      :.||            ..:||.|..:.:.::.....
Zfish   289 CFLEYEDHKTAAQARRRLMSGKVKVWGNLVTVEWADPIEDPDPEVMAKVKVLFVRNLANSVTEEI 353

  Fly   353 ASKTSSK-------TKAKN------QNSAGAKKRLDKKKGKENGSLKKE------GAPTGQKKKS 398
            ..|...:       .|.|:      .:..||.|.|.:..|||   |:.|      ..|..||:|.
Zfish   354 LEKAFGQFGNLERVKKLKDYAFVHFNDRDGAVKALTEMNGKE---LEGEHIEIVFAKPPDQKRKE 415

  Fly   399 EYRGVKVDGIKKAKKPKKKS 418
                      :||::...|:
Zfish   416 ----------RKAQRQAAKT 425

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	22/95 (23%)
		RRM_SF	261..332	CDD:302621	22/78 (28%)
syncrip	NP_999861.1	hnRNP-R-Q	103..622	CDD:273732	80/371 (22%)
		RRM1_hnRNPQ	161..239	CDD:240927	22/89 (25%)
		RRM2_hnRNPQ	241..325	CDD:240933	25/85 (29%)
		RRM3_hnRNPQ	337..408	CDD:240939	15/73 (21%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910