Protein Alignment CG12288 and rnp24

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_594970.1
• Gene: rnp24 / 2542965
• PomBaseID: SPAC3G6.04
• Length: 369
• Species: Schizosaccharomyces pombe
• Alignment Length: 373
• Identity: 92/373 - (24%)
• Similarity: 146/373 - (39%)
• Gaps: 87/373 - (23%)

  Fly    69 EKKKAKKQAQKLKKQQNKLAPKEIKTEPEAQVKVESKATKKEKVEKEPTTAPN--EKPKGKVSKK 131
            :||:.|.:::  |:.:|::...::........|:..|..|..|::|:....|.  |:.|.|..|:
pombe    18 DKKRKKHESE--KEGENEVLEIDVTKPVPPSKKLMRKLRKAGKIDKDGNWTPEALEEAKKKEEKR 80

  Fly   132 AK---ANANNKDEEGVKRIRNPAEEAST----VFVGNLPINTKRVQLVKLF-------------- 175
            .|   |....| |||..:     ||:..    ::||||..:|.:..|...|
pombe    81 LKRLDAKYGRK-EEGESQ-----EESKRSPWGIWVGNLSFHTTKEILTDFFVRETSEMIKEVSEE 139

  Fly   176 --QPYGLVQSIRLRTAGGKQLFKHKQRKVAGSLNAYVVLEKPEIAQQAL-----ALNGSE--FKE 231
              :|....|..|:.....|:  |..|.|..    |||.....:..:.||     ||||..  .|.
pombe   140 NIKPITTEQITRIHMPMSKE--KRFQNKGF----AYVDFATEDALKLALQCSEKALNGRNILIKS 198

  Fly   232 N-HLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDG 295
            | .....|:..|....:....|.|.|:....:|||:|.:..|:..|:|.|...|:|..:|.:...
pombe   199 NTDFSGRPSKPANTLSKTASIQSSKKEPSSILFVGNLDFETTDADLKEHFGQVGQIRRVRLMTFE 263

  Fly   296 DKG-CKGVAYVCFQKPDAVGLALEL------------------NQTLL--------------DDR 327
            |.| |||..:|.|...|....|:||                  |::.:              :|:
pombe   264 DTGKCKGFGFVDFPDIDTCMKAMELGHNSWRLEYGEDRSKRMRNKSPMARSGRFNDAESLGQEDK 328

  Fly   328 PINVERYQVKKLGAKQVRDAAAASAASKTSSKTKAKNQNSAGAKKRLD 375
            | |.:|  .:|:..:.||..||.:.|.::|    |.....||.|.:.|
pombe   329 P-NFKR--ARKIDPRSVRPGAALAKAQRSS----AAIVEPAGQKIKFD 369

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	25/109 (23%)
		RRM_SF	261..332	CDD:302621	26/103 (25%)
rnp24	NP_594970.1	RRM	9..308	CDD:223796	75/303 (25%)
		RRM1_Nop13p_fungi	107..199	CDD:240842	24/97 (25%)
		RRM2_Nop13p_fungi	230..299	CDD:240843	22/68 (32%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910