Protein Alignment CG12288 and gar2

DIOPT Version :10

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_593531.1
• Gene: gar2 / 2542869
• PomBaseID: SPAC140.02
• Length: 500
• Species: Schizosaccharomyces pombe
• Alignment Length: 416
• Identity: 103/416 - (24%)
• Similarity: 161/416 - (38%)
• Gaps: 106/416 - (25%)

  Fly     6 AKESEKAELKPIK-----KEPGVVEDGKVTKKSKTKPKKKTVKVPKDEVKAAVQESPKKLSAKDL 65
            ||:|.|.::.|.|     |.....|..|.:.|.:.|.|||.....:.|.:::..||....|..:.
pombe    41 AKQSSKTDVSPKKSKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESES 105

  Fly    66 AKIEKKKAK--------------KQAQKLKKQQNKLAPKEIKTEPEAQVKVESK----------- 105
            :..|.:.:.              |..:|.:......:..|.:.|.||.||:|.|
pombe   106 SSSESESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSES 170

  Fly   106 ---------ATKKEKVEKEPTTAPNEKPKG--KVSKKAKANANNKDEEG---------------- 143
                     ::.:.:.|:|......||.:|  :.|..:::::::..|.|
pombe   171 SSSESESESSSSESEEEEEVVEKTEEKKEGSSESSSDSESSSDSSSESGDSDSSSDSESESSSED 235

  Fly   144 -VKRIRNPA---------------EEASTVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGK 192
             .||...||               .|..|||||.|..|.....|.:.|:.||.:       .|.:
pombe   236 EKKRKAEPASEERPAKITKPSQDSNETCTVFVGRLSWNVDDQWLGQEFEEYGTI-------VGAR 293

  Fly   193 QLFKHKQRKVAGSLNAYVVLEKPEIAQQALALNGSEFKENHLRVT--------PAS-------MA 242
            .:...:..:..|  ..||..|.||.|:.|:|.||:  ||...|:.        ||:       .|
pombe   294 VIMDGQSGRSKG--YGYVDFETPEAAKAAVAANGT--KEIDGRMVNLDLSNPRPANPQPYAQQRA 354

  Fly   243 EKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQDGDKG-CKGVAYVC 306
            ..||. :..:|||     |:|||:|.::|||:.|...|..||:|..||...|...| .||..||.
pombe   355 GNFGD-QLSEPSD-----TVFVGNLSFNATEDDLSTAFGGCGDIQSIRLPTDPQSGRLKGFGYVT 413

  Fly   307 FQKPDAVGLALELNQTLLDDRPINVE 332
            |...|:....:|:|...:..||..::
pombe   414 FSDIDSAKKCVEMNGHFIAGRPCRLD 439

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	26/80 (33%)
		RRM_SF	261..332	CDD:473069	27/71 (38%)
gar2	NP_593531.1	PRK13808	<2..64	CDD:172341	7/22 (32%)
		RRM_SF	264..339	CDD:473069	26/85 (31%)
		RRM2_gar2	368..439	CDD:409882	26/70 (37%)