DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12288 and Tial1

DIOPT Version :9

Sequence 1:NP_609822.1 Gene:CG12288 / 35027 FlyBaseID:FBgn0032620 Length:435 Species:Drosophila melanogaster
Sequence 2:NP_033409.1 Gene:Tial1 / 21843 MGIID:107913 Length:392 Species:Mus musculus


Alignment Length:241 Identity:57/241 - (23%)
Similarity:93/241 - (38%) Gaps:61/241 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   156 TVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAGSLNAYVV--------- 211
            |::||||..:...|.:::||...|..:|.::.|.      :...|:|..|:...|:         
Mouse    10 TLYVGNLSRDVTEVLILQLFSQIGPCKSCKMITE------QPDSRRVNSSVGFSVLQHTSNDPYC 68

  Fly   212 ----LEKPEIAQQALALNGSEFKENHLRV----TPASMAEKFGQAKDKQPSDKDAKRTIFVGSLK 268
                .|..:.|....|:||.:.....::|    ||:|           |..|......:|||.|.
Mouse    69 FVEFYEHRDAAAALAAMNGRKILGKEVKVNWATTPSS-----------QKKDTSNHFHVFVGDLS 122

  Fly   269 YSATEEQLREIFSSCGEIDYIRCLQDGDKG-CKGVAYVCF-QKPDAVGLALELNQTLLDDRPINV 331
            ...|.|.::..|:..|:|...|.::|...| .||..:|.| .|.||....:.:..          
Mouse   123 PEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGFVSFYNKLDAENAIVHMGG---------- 177

  Fly   332 ERYQVKKLGAKQVRD--AAAASAASKTSSKTKAK--------NQNS 367
                 :.||.:|:|.  |.....|.|::.:|..|        ||:|
Mouse   178 -----QWLGGRQIRTNWATRKPPAPKSTQETNTKQLRFEDVVNQSS 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12288NP_609822.1 RRM1_RBM34 155..237 CDD:240840 21/97 (22%)
RRM_SF 261..332 CDD:302621 19/72 (26%)
Tial1NP_033409.1 RRM1_TIAR 10..107 CDD:410028 24/113 (21%)
RRM2_TIAR 113..192 CDD:410029 24/93 (26%)
RRM3_TIAR 222..294 CDD:241064
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 363..392
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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