Protein Alignment CG12288 and sf3b4

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_705947.3
• Gene: sf3b4 / 192318
• ZFINID: ZDB-GENE-020419-22
• Length: 400
• Species: Danio rerio
• Alignment Length: 225
• Identity: 64/225 - (28%)
• Similarity: 94/225 - (41%)
• Gaps: 32/225 - (14%)

  Fly   155 STVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQRKVAGSLNAYVVLE--KPEI 217
            :||:||.|........|.:||...|.|.:..:           .:.:|.|....|..:|  ..|.
Zfish    13 ATVYVGGLDEKVSEPLLWELFLQAGPVVNTHM-----------PKDRVTGQHQGYGFVEFLSEED 66

  Fly   218 AQQAL-ALNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFS 281
            |..|: .:|..:.....:||..||...|          :.|....||:|:|.....|:.|.:.||
Zfish    67 ADYAIKIMNMIKLYGKPIRVNKASAHNK----------NLDVGANIFIGNLDPEIDEKLLYDTFS 121

  Fly   282 SCGEI-DYIRCLQDGDKG-CKGVAYVCFQKPDAVGLALE-LNQTLLDDRPINVERYQVKKLGAKQ 343
            :.|.| ...:.::|.|.| .||.|::.|...||...|:| :|...|.:|||.|. |..|| .:|.
Zfish   122 AFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVS-YAFKK-DSKG 184

  Fly   344 VRDAAAAS---AASKTSSKTKAKNQNSAGA 370
            .|..:||.   ||....|:....:|..|.|
Zfish   185 ERHGSAAERLLAAQNPLSQADRPHQLFADA 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	19/84 (23%)
		RRM_SF	261..332	CDD:302621	26/73 (36%)
sf3b4	NP_705947.3	RRM1_SF3B4	15..88	CDD:240780	19/83 (23%)
		RRM2_SF3B4	99..181	CDD:240781	30/83 (36%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.910