Protein Alignment CG12288 and rnp-7

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_498565.2
• Gene: rnp-7 / 176002
• WormBaseID: WBGene00004390
• Length: 332
• Species: Caenorhabditis elegans
• Alignment Length: 246
• Identity: 51/246 - (20%)
• Similarity: 102/246 - (41%)
• Gaps: 62/246 - (25%)

  Fly   165 NTKR------VQLVKLFQ-PYGLVQSIRLRTAGGKQLFKHKQRKVAGSLNAYVVLEKPEIAQQAL 222
            |.||      .|.::||: |......|.:.|   |...|.::|:....|.||.|       :|.:
 Worm    33 NAKRAPMTGVAQYIQLFEDPKDTPAKIPVVT---KAEAKEEKRRQKDELLAYKV-------EQGI 87

  Fly   223 ALNGSEFKENHLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSATEEQLREIFSSCGEID 287
            |                    .:..|::.:.|: |..||:|||.:.|..:|.:||..|.:.|:|.
 Worm    88 A--------------------TWNPAENPRASE-DPYRTLFVGRINYETSESKLRREFEAYGKIK 131

  Fly   288 YIRCLQDGDKGCKGVAYV----------CFQKPDAVGLALELNQTLLD-DRPINVERYQVKKLG- 340
            .:..:.|.....:|.|::          .::|.|  |:.::..:.::| :|....:.:..::||
 Worm   132 KLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKAD--GIKVDGKRLVVDYERGRTQKTWLPRRLGG 194

  Fly   341 ----AKQVRDAAAA----SAASKTSSKTKAKNQNSAGAKKRLDKKKGKENG 383
                .::.|:|.:.    ..||......:.:::..:|::.|  ::....||
 Worm   195 GKGDTRKTREAKSVIEEREIASGFGGGYEDRDRERSGSRDR--RQDSYRNG 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	18/78 (23%)
		RRM_SF	261..332	CDD:302621	19/81 (23%)
rnp-7	NP_498565.2	U1snRNP70_N	4..94	CDD:371969	18/90 (20%)
		RRM_snRNP70	103..192	CDD:240682	20/90 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910