Protein Alignment CG12288 and rsp-2

DIOPT Version :9

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_496441.1
• Gene: rsp-2 / 174747
• WormBaseID: WBGene00004699
• Length: 281
• Species: Caenorhabditis elegans
• Alignment Length: 304
• Identity: 57/304 - (18%)
• Similarity: 115/304 - (37%)
• Gaps: 76/304 - (25%)

  Fly   157 VFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFKHKQ-----------RKVAGSLNAYV 210
            |::|.||.......:...|:.||.:..:.::...|...|:.::           :::.|.   .|
 Worm     4 VYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCGE---RV 65

  Fly   211 VLEKPEIAQQALALN----GSEFKENHLRVTPASMAEKFGQAKDKQPSDKDAKRTIFVGSLKYSA 271
            :||.|   ::.:..|    ||.|:         .....|.:..::|.|::.::..    |.::..
 Worm    66 ILEFP---RRKVGYNEERSGSGFR---------GREPTFRKGGERQFSNRYSRPC----STRFRL 114

  Fly   272 TEEQLREIFSSCGEIDYIRCL------QDGDKGCKGVAYVCFQKPDAVGLALELNQTLLDDRPIN 330
            ..:.|...:|.....|:||.|      .:..|.....|.|||...|.:..|:    ..|....:|
 Worm   115 VIDNLSTRYSWQDIKDHIRKLGIEPTYSEAHKRNVNQAIVCFTSHDDLRDAM----NKLQGEDLN 175

  Fly   331 VERYQVKKLGAKQVRDAAAASA---ASKTSSKTKAKN----------------QNSAGAKKRLDK 376
            ..:.:.    ..:.||.:.:.:   .|::.|.|::::                ..||..|||.||
 Worm   176 GRKLKC----TDETRDRSRSRSPRRRSRSRSPTRSRSPPARRRSPGSDRSDRKSRSASPKKRSDK 236

  Fly   377 KKGKENGSLKKEGAPTGQKKKSEYRGVKVDGIKKAKKPKKKSND 420
            :...|:.|..:.|   |::.:|.      ....::..|||:.::
 Worm   237 RARSESKSRSRSG---GRRSRSN------SPPNRSPSPKKRRDN 271

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	155..237	CDD:240840	18/94 (19%)
		RRM_SF	261..332	CDD:302621	16/76 (21%)
rsp-2	NP_496441.1	RRM_SF	112..184	CDD:302621	15/79 (19%)
		RRM1_SRSF4_like	3..71	CDD:240783	14/72 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910