Protein Alignment CG12288 and tiar-1

DIOPT Version :10

• Sequence 1: NP_609822.1
• Gene: CG12288 / 35027
• FlyBaseID: FBgn0032620
• Length: 435
• Species: Drosophila melanogaster
• Sequence 2: NP_495121.1
• Gene: tiar-1 / 173967
• WormBaseID: WBGene00015943
• Length: 408
• Species: Caenorhabditis elegans
• Alignment Length: 219
• Identity: 54/219 - (24%)
• Similarity: 91/219 - (41%)
• Gaps: 30/219 - (13%)

  Fly   132 AKANANNKDEEGVKRIRNPAEEASTVFVGNLPINTKRVQLVKLFQPYGLVQSIRLRTAGGKQLFK 196
            |:.::...:.||. .:.|.::|..|::||||........:..||...|.|...       |.:|.
 Worm    24 ARMHSKLAEREGF-HLGNGSDEPRTLYVGNLDSTVTEDFIATLFNQIGSVTKT-------KVIFD 80

  Fly   197 HKQRKVAGSLNAYVVLEKPEIAQQALAL---NGSEFKENHLRVTPASMAEKFGQAKDKQPSDKDA 258
                   ||.:.|..:|..:..|.:.||   |.....:..::|   :.|.:.||    |.|..|.
 Worm    81 -------GSNDPYAFVEFSDHGQASQALQTMNKRLLLDREMKV---NWAVEPGQ----QQSKIDT 131

  Fly   259 KR--TIFVGSLKYSATEEQLREIFSSCGEIDYIRCLQD-GDKGCKGVAYVCFQKPDAVGLALE-L 319
            .|  .:|||.|......::|||.|...|::...:.::| .....||..:|.:.|.:....|:| :
 Worm   132 TRHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196

  Fly   320 NQTLLDDRPINVERYQVKKLGAKQ 343
            |...|..|.|.. .:..:|.|.::
 Worm   197 NGQWLGRRTIRT-NWATRKPGDQE 219

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG12288	NP_609822.1	RRM1_RBM34	156..237	CDD:409828	19/83 (23%)
		RRM_SF	261..332	CDD:473069	20/72 (28%)
tiar-1	NP_495121.1	PABP-1234	47..>302	CDD:130689	49/195 (25%)
		RRM2_TIA1_like	136..210	CDD:409789	20/74 (27%)